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Computational proteomics and AI at HUPO 2026

Sep 27 – Oct 1, 2026 Singapore ~1.8k attendees Website

77 organizations at HUPO 2026 present work in computational proteomics & AI: 52 universities and research institutes, 15 suppliers and service providers, 8 hospitals and 2 pharma and biotech companies. Between them they bring 322 presentations to the program. Most represented: Westlake University (15 on the program), KTH Royal Institute of Technology (14 on the program), Max Planck Institute of Biochemistry (11 on the program). 46 of them have their own page in this guide. As of Sep 25, 2026.

All 393 organizations at HUPO 2026 →

Showing 1–2 of 77 organizations

Organization	HUPO 2026 Attendance
Westlake University Hangzhou, China
westlake.edu.cn Universities & research institutes Private research university in Hangzhou, China.	Talk Sun Sep 27 6:00pm–7:30pm Part of Welcome Networking Reception and Friends of HUPO Poster Reception AI proteomics initiative Exhibit Hall AI & data Talk Mon Sep 28 7:45am–8:45am Part of Thermo Fisher Scientific / Olink Breakfast Seminar - From Measurement to Meaning: High-Throughput Proteomics for Biological Specificity and Translational Confidence Discovering Therapeutic Targets through Statistical Inference of Protein Complexes Talk hosted by Thermo Fisher Scientific and Olink Room 334-336 Methods · Clinical Talk Mon Sep 28 9:45am–10:30am Part of Coffee Break & Flash Talks 1 ProteoFlow: Multi-Marginal Flow Matching for Proteome-Wide Chemical Perturbation Response Generation Exhibit Hall AI & data · Drug discovery Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 MassNet: Billion-Scale AI-ready Mass Spectral Corpus Empowering Scalable Deep Learning in Proteomics Exhibit Hall · Board PS01.001 AI & data Collaborators: Fudan University, University of British Columbia +1 more Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 JINGWEI: Deep Structure-Preserving Imputation for Quantitative Proteomics Exhibit Hall · Board PS01.011 AI & data Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 ProteoFlow: Multi-Marginal Flow Matching for Proteome-Wide Chemical Perturbation Response Generation Exhibit Hall · Board PS01.012 AI & data · Drug discovery Collaborators: Peking University, Tsinghua University Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 MassNet-DIA: Over Three Billion DIA-MS Dataset Enabling Intrinsic Deep Learning in Protein Identification Exhibit Hall · Board PS01.014 AI & data Collaborators: Fudan University Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 Yinglong: An AI Agent for Diagnosis and Maintenance in LC-MS/MS Systems Exhibit Hall · Board PS01.015 AI & data · Methods Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 Predicting Yeast Proteome Dynamics Across Genotypes and Combinatorial Perturbations Exhibit Hall · Board PS01.076 AI & data · Multi-omics Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 Non-Invasive Urine Proteomics Reveals Multi-Organ Aging Signatures for Health Assessment Exhibit Hall · Board PS01.108a Clinical Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 Multimodal AI-enabled Mass Spectrometry-Based Expansion Proteomics for Whole-Slide at Single-Cell Resolution Exhibit Hall · Board PS01.169 Single-cell · Methods Collaborators: Zhejiang University, China Pharmaceutical University Session Mon Sep 28 4:15pm–5:20pm Mentoring Session - Being a Scientist: Balancing Research, Admin, Teaching and all That Other Stuff Room 334-336 Talk Tue Sep 29 7:45am–8:45am Part of Thermo Fisher Scientific Breakfast Seminar - Ride the Wave: Innovation Now for Precision Health From the Human Proteome to Virtual Cells for Precision Medicine Talk hosted by Thermo Fisher Scientific Room 334-336 Clinical Session Tue Sep 29 10:30am–12:00pm Proteomics in Human Disease - Cancer 1 Nicoll 2-3 Clinical Talk Tue Sep 29 10:30am–12:00pm Part of One Health: Infectious Disease & Microbiomes Cross-species Generalizable De Novo Peptide Sequencing Uncovers Novel Functional Peptides and Host-microbial Symbiotic Proteome Room 334-336 One Health Collaborators: Fudan University Talk Tue Sep 29 10:30am–12:00pm Part of Spatial & Imaging Proteomics Iterative Tissue Expansion Enables Spatial Proteomics Toward Subcellular Resolution Room 331 Single-cell Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 DDA-BERT: End-to-End Training for Data-Dependent Acquisition Mass Spectrometry-Based Proteomics Exhibit Hall · Board PS02.151a AI & data Collaborators: Huazhong University of Science and Technology Session Tue Sep 29 4:15pm–5:20pm Proteome Dynamics in Cell Signaling Nicoll 1 PTMs & glyco Talk Tue Sep 29 4:15pm–5:20pm Part of Proteome Dynamics in Cell Signaling CRISPR-based Perturbation Proteomics for Decoding Protein Function and drug target discovery Nicoll 1 PTMs & glyco Session Wed Sep 30 10:30am–12:00pm Proteomics in Human Disease - Aging Room 331 Clinical Talk Wed Sep 30 10:30am–12:00pm Part of Proteomics in Human Disease - Aging Proteome Remodeling Triggered by Thyroid Aging and Tumorigenesis Room 331 Clinical Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 A Pretrained Joint Embedding Framework for Peptide–HLA Binding and MS-Based Immunopeptidomics Board PS03.076e AI & data Collaborators: Zhejiang University, Max Planck Institute of Biochemistry Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 Genotype-Environment Interaction Orchestrates Global Proteome, Phosphoproteome and Metabolome Dynamics Board PS03.109 Multi-omics Session Wed Sep 30 3:00pm–4:05pm Bioinformatics Hub: Unlocking Hidden Proteomics Data: Turning Non-Sensitive In-House MS-Based Datasets Into AI-Ready Resources Room 330 AI & data
KTH Royal Institute of Technology Stockholm, Sweden
kth.se Universities & research institutes Technical university in Stockholm, Sweden, and a host of the SciLifeLab national life-science centre.	Talk Mon Sep 28 7:45am–8:45am Part of Thermo Fisher Scientific / Olink Breakfast Seminar - From Measurement to Meaning: High-Throughput Proteomics for Biological Specificity and Translational Confidence The Human Disease Blood Atlas: Exploring the circulating proteome across health and disease Talk hosted by Thermo Fisher Scientific and Olink Room 334-336 Methods · Clinical Workshop Mon Sep 28 12:15pm–1:15pm Nautilus Biotechnology Lunch Seminar - Can Proteoforms Change Our Understanding of Biology Workshop hosted by Nautilus Biotechnology Room 334-336 Structural Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 The Blood Proteome Across Health and Disease Using Two Affinity-Based Platforms Exhibit Hall · Board PS01.084 Clinical · Methods Poster Mon Sep 28 1:15pm–3:00pm Part of Poster session 1 Cross-Platform Plasma Proteomic Profiling of Venous Thromboembolism Exhibit Hall · Board PS01.108e Clinical Collaborators: Karolinska Institutet Session Mon Sep 28 3:00pm–4:05pm 3-min Thesis Competition Room 334-336 Talk Mon Sep 28 3:00pm–4:05pm Part of 3-min Thesis Competition The Stories in Our Blood Room 334-336 Clinical Session Tue Sep 29 10:30am–12:00pm Bioinformatics Hub: Integrating Multi-Omics Data and AI Tools into the Human Protein Atlas Ecosystem Room 330 Multi-omics · AI & data Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 Exploration of Immune Phenotypes in Self-Sampling Citizens Exhibit Hall · Board PS02.013 Clinical Collaborators: Karolinska Institutet, Max Planck Institute of Biochemistry Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 Unlocking the Dried Blood Proteome: Utility Beyond Discovery Exhibit Hall · Board PS02.013a Clinical · Methods Collaborators: Karolinska Institutet Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 Integrative Plasma Protein Profiling in Parkinson's Disease Exhibit Hall · Board PS02.027 Clinical Collaborators: Karolinska Institutet Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 Longitudinal Analysis of the Circulating Proteome Across Pregnancy Trimesters Exhibit Hall · Board PS02.058 Clinical Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 Multi-Platform Linking of the Plasma Proteome Across Abundance Scales Enables a Novel Framework for Capturing Disease Biology Exhibit Hall · Board PS02.061 Methods · Clinical Collaborators: ProteomEdge Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 HDAnalyzeR: A Modular R Package for Reproducible High-Dimensional Biological Data Analysis and Biomarker Discovery Exhibit Hall · Board PS02.097 AI & data Poster Tue Sep 29 1:15pm–3:00pm Part of Poster session 2 The Human Secretome and Membrane Proteome Reveal Tissue Specialization and Functional Organization of Protein Localization Exhibit Hall · Board PS02.163 Single-cell Talk Tue Sep 29 4:15pm–5:20pm Part of Clinical Proteomics 2 Autoantibody and Protein Profiling to Improve Characterization and Stratification of Systemic Autoimmune Rheumatic Diseases Room 331 Clinical Session Wed Sep 30 9:45am–10:30am Coffee Break & Flash Talks 3 Exhibit Hall Talk Wed Sep 30 9:45am–10:30am Part of Coffee Break & Flash Talks 3 Protein Clustering Based on Pan-Disease Profiles in Plasma Reveals Stable Biological Modules and Unexpected Sex-Biased Expression Patterns Exhibit Hall Clinical · Multi-omics Workshop Wed Sep 30 12:15pm–1:15pm Illumina Lunch Seminar - Decoding Human Biology Through Proteomics: From Population Cohorts to Molecular Mechanisms Workshop hosted by Illumina Room 334-336 Clinical Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 Protein-Based Patient Stratification in ALS Board PS03.011 Clinical Collaborators: Karolinska Institutet Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 Protein Clustering Based on Pan-Disease Profiles in Plasma Reveals Stable Biological Modules and Unexpected Sex-Biased Expression Patterns Board PS03.078 Clinical · Multi-omics Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 Integration of Bulk Mass Spectrometry and Deep Visual Proteomics into the Human Protein Atlas Board PS03.108 Single-cell · AI & data Collaborators: Max Planck Institute of Biochemistry, Karolinska Institutet +2 more Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 Multiplex Serology and High-Dimensional Plasma Proteomics in Dengue Board PS03.144 One Health · Clinical Collaborators: Karolinska Institutet Poster Wed Sep 30 1:15pm–3:00pm Part of Poster session 3 Arboviral Antibody Profiles in a Pediatric Cohort of suspected Central Nervous System Infections in southwestern Uganda Board PS03.152a One Health · Clinical Collaborators: Karolinska Institutet

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