ASHG 2026 · Tier 1 Academic

University of Wisconsin–Madison at ASHG 2026

Madison, Wisconsin

University of Wisconsin–Madison at ASHG 2026 in Montréal: 11 presentations (9 posters, 1 lightning talk, 1 platform talk); 6 research groups.

11
presentations on the program
6
research groups identified
1
Reviewers’ Choice abstracts

Explore everyone at ASHG 2026 →

OrganizationASHG 2026 Attendance
University of Wisconsin–Madison
Madison, Wisconsin
3 PIs · 2 PhD Students · 1 Postdoc · 1 Staff Scientist
Lu Lablulab.pophealth.wisc.edu
Dry lab
Develops statistical-genetics methods for plasma proteomics, transcriptomics, metabolomics, single-cell RNA sequencing and whole-genome bisulfite sequencing. Applies them to diabetes, Alzheimer’s disease and drug-target discovery.
63 papers since 2024
Integrative proteogenomic analysis identifies COL6A3-derived endotrophin as a mediator of the effect of obesity on coronary artery disease
Nature Genetics, 2025
Valid inference for machine learning-assisted genome-wide association studies
Nature Genetics, 2024
SharePro: an accurate and efficient genetic colocalization method accounting for multiple causal signals
Bioinformatics, 2024
Source: OpenAlex author A5002177152
Funded by NIH/NIGMS
NIH/NIGMS, R35 Maximizing Investigators’ Research Award · active
“supported by an NIH/NIGMS R35 Maximizing Investigators’ Research Award”
Source: lab pages
10 platforms and techniques
Analyzes
plasma proteomics, single-cell RNA sequencing, whole-genome bisulfite sequencing, electronic health record data
Techniques
Mendelian randomization, polygenic risk scores, machine learning, Bayesian colocalization, fine-mapping, gene-environment interaction
Source: lab pages
Currently hiring
“We will have openings for graduate and postdoctoral trainees in 2027”
Source: lab positions page
Poster
Fri Oct 23
2:30 pm
Dissecting Glycemic and Non-Glycemic Genetic Components of HbA1c Improves Diabetes Risk Stratification in Prediabetes
Complex Traits and Polygenic Disorders
DiabetesPolygenic risk scoreStatistical geneticsGenetic epidemiology
Talk
Sat Oct 24
8:30 am
Disentangling adiposity-related and non-adiposity-related genetic pathways for type 2 diabetes
Decomposing Diabetes: Approaches for Understanding Diabetes Heterogeneity
DiabetesGenome-wide association studyMendelian randomizationObesity
Baby Badger Networkgeneticsinwisconsin.wisc.edu/baby-badger-network
~13 people
Increases access to genomic testing for critically ill infants in Wisconsin NICUs. Trains healthcare providers serving critically ill neonates.
Funded by Advancing a Healthier Wisconsin Endowment, WI Department of Health
Advancing a Healthier Wisconsin Endowment · active
“Funding for the BBN is generously provided by Advancing a Healthier Wisconsin Endowment.”
WI Department of Health, Maternal & Child Health Title V Block grant · active
“Funding for the BBN ECHO series is provided by the Maternal & Child Health Title V Block grant to the WI Department of Health”
Source: lab pages
3 platforms and techniques
Techniques
Exome sequencing, Whole-genome sequencing, Variant interpretation
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
Increasing Access to Genomic Testing and Improving Care of Critically Ill Babies in Wisconsin through the Baby Badger Network
Health Services Research and Implementation Science
Exome/genome sequencingGenetic counselingClinical testing
Churpek Labjanechurpek.labs.wisc.edu/team
Wet + dry lab~11 people
Studies inherited cancer and blood-disorder genetics using whole-exome/genome sequencing, custom microarrays and functional assays. Improves diagnosis and prevention with patients, families and registries.
17 papers since 2024
Treatment of Pleural Mesothelioma: ASCO Guideline Update
Journal of Clinical Oncology, 2025
ATM-dependent DNA damage response constrains cell growth and drives clonal hematopoiesis in telomere biology disorders
Journal of Clinical Investigation, 2025
Real world predictors of response and 24-month survival in high-grade TP53-mutated myeloid neoplasms
Blood Cancer Journal, 2024
Source: OpenAlex author A5017604098
Funded by Department of Defense, NIH
Department of Defense, Award W81XWH2110817 · active
“This research is supported by a Department of Defense Award (W81XWH2110817)”
NIH, TL1 Predoctoral Training Program via UW Madison Institute for Clinical and Translational Research · active
“NIH TL1 Predoctoral Training Program via UW Madison Institute for Clinical and Translational Research”
Source: lab pages
13 platforms and techniques
Works with
CRISPR-based assays, Cell-based reporter systems, Whole-exome sequencing, Whole-genome sequencing, RNA sequencing, Custom microarrays, Long-read sequencing
Techniques
CRISPR-based perturbation, Functional HR assays, Mesothelioma cell line models, Conditional Brca1 knockout mouse models, Cultured skin fibroblasts, Laboratory-based functional testing
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
Enhanceropathies and the phenotypic diversity of SHH-related variants: a case report and review of terminal 7q36 deletions
Prenatal, Perinatal, Reproductive, and Developmental Genetics
Chromosomal deletionsClinical geneticsRare variantsCharacterization of syndromes
Warren Andersen Labandersenlab.wiscweb.wisc.edu
Dry lab
Analyzes cohort, cancer-registry and mortality data with molecular-level tumor characteristics. Studies colorectal cancer disparities using genetic, social and behavioral factors.
Funded by National Institutes of Health, Institute for Clinical and Translational Research
National Institutes of Health · active
“Andersen is leading an NIH-funded study examining how and why mortality rates for colorectal cancer differ markedly across populations.”
Institute for Clinical and Translational Research, Translational Basic & Clinical Pilot Award · active
“receiving the ICTR Translational Basic & Clinical Pilot Award for her project “Biomarkers to Personalize Colorectal Cancer Screening & Treatment.””
Source: lab pages
1 platform and technique
Techniques
molecular epidemiologic methods
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
Characterization of consensus molecular subtypes of colorectal cancer by demographic and clinical features
Cancer
Collaborators: University of Wisconsin Carbone Cancer Center, Boston University +2 more
CancerEpidemiologyGenetic epidemiologyTranscriptome
Lu Laboratoryqlu-lab.org
Works in population genetics and computational genetics.
45 papers since 2024
Associations between common genetic variants and income provide insights about the socio-economic health gradient
Nature Human Behaviour, 2025
Deciphering the impact of genomic variation on function
Nature, 2024
Pervasive biases in proxy genome-wide association studies based on parental history of Alzheimer’s disease
Nature Genetics, 2024
Source: OpenAlex author A5083375749
Talk
Wed Oct 21
1:51 pm
Mitigating cryptic and inevitable PGS overfitting in the era of million-person biobank cohorts
Advances in Population Genetics, Genetic Epidemiology, and Omics
Polygenic risk scoreStatistical genetics
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
Mitigating cryptic and inevitable PGS overfitting in the era of million-person biobank cohorts
Statistical Genetics and Genetic Epidemiology
Polygenic risk scoreStatistical genetics
Poster
Thu Oct 22
4:15 pm
Integrating single-cell omics data across species using matrix factorization regularized by gene-level phylogenies
Artificial Intelligence and Machine Learning
BioinformaticsComputational toolsEvolutionRNA-seq
Paulsen Lab
Works in clinical genetics.
Poster
Thu Oct 22
4:15 pm
Literature review of stakeholder attitudes towards the return of individual research results from clinical neurodegenerative research
Genetic Counseling, ELSI, and Education
Ethical, legal, and social implicationsGenetic testingNeurodegenerationPsychosocial issues
2 more presenters — research group not yet identified

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