ASHG 2026 · Tier 1 Academic

University of Washington at ASHG 2026

Seattle, Washington

University of Washington at ASHG 2026 in Montréal: 39 presentations (27 posters, 6 platform talks, 3 featured symposia); 26 research groups; an exhibit booth.

39
presentations on the program
26
research groups identified
3
sessions invited to or moderated
6
Reviewers’ Choice abstracts

Explore everyone at ASHG 2026 →

OrganizationASHG 2026 Attendance
University of Washington
Seattle, Washington
10 PIs · 10 PhD Students · 8 Staff Scientists · 5 Postdocs
Booth
Exhibiting (booth not yet listed)
Wed, Oct 219:45am–4:30pmThu, Oct 229:45am–1:30pmFri, Oct 239:45am–4:30pm
Fowler Labfowlerlab.gs.washington.edu
Wet + dry lab~19 people
Runs VAMP-seq to measure effects of thousands of missense variants. Uses functional-genomics data to interpret human genetic variation and disease.
10 platforms and techniques
Works with
VAMP-seq, FISSEQ, Saturation Genome Editing
Techniques
deep mutational scanning, massively parallel reporter assay, genome engineering, recombinases, Cas9 nuclease studies, visual cell sorting, VAMP-seq
Source: lab pages
No funding stated · No openings posted
Talk
Wed Oct 21
2:07 pm
Gene- and domain-aware calibration increases the clinical utility of variant effect predictors
Advances in Clinical Genomics in the Era of AI, Long-Read Sequencing, Precision Medicine, and Genomic Care Delivery
Collaborators: Brotman Baty Institute, Icahn School of Medicine at Mount Sinai +1 more
Variant interpretationPrecision medicineMachine learningComputational tools
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
Gene- and domain-aware calibration increases the clinical utility of variant effect predictors
Artificial Intelligence and Machine Learning
Collaborators: Brotman Baty Institute, Icahn School of Medicine at Mount Sinai +1 more
Computational toolsGenetic testingMachine learningPrecision medicine
Talk
Thu Oct 22
11:30 am
Multimodal functional data reveals pathogenicity, pathomechanism, and genotype-phenotype relationships for ~75,000 MAP kinase signaling pathway variants
Uptown Funk(tion): Don’t Believe Me, Just Perturb
Cancer syndromesGenomicsMolecular pathophysiologyRare variants
Poster
Thu Oct 22
4:15 pm
★ Reviewers’ Choice
MaveMD: A functional data resource for genomic medicine
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: The University of Melbourne
BioinformaticsDatabasesGenetic variationPrecision medicine
Bamshad Labpeds.uw.edu/specialties/genetic-medicine/bamshad
Wet + dry lab~8 people
Studies human genomics using exome and whole-genome sequencing, DNA extraction and quantification. Supports rare-disease diagnosis and precision genetic medicine with families, clinicians and researchers.
54 papers since 2024
Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition
Nature Genetics, 2025
Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans
The Journal of Experimental Medicine, 2024
Guidance on Use of Race, Ethnicity, and Geographic Origin as Proxies for Genetic Ancestry Groups in Biomedical Publications
JAMA, 2024
Source: OpenAlex author A5064174809
Funded by Allan and Phyllis Treuer
Allan and Phyllis Treuer, Endowed Chair in Genetics and Development · active
“Allan and Phyllis Treuer Endowed Chair in Genetics and Development”
Source: lab pages
10 platforms and techniques
Works with
Exome sequencing, Whole-genome sequencing, Pico Assay quantification, Real Time PCR quantification, Spectrophotometer quantification
Techniques
DNA extraction, Rare-disease gene discovery, Genetic testing implementation, Biobanking, Open genetic-data sharing
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Dissecting parental "relief" in SeqFirst-neo: a mixed-methods analysis
Health Services Research and Implementation Science
Collaborators: Seattle Children's Hospital, Brotman Baty Institute
Clinical geneticsClinical testingExome/genome sequencingGenetic counseling
Poster
Thu Oct 22
4:15 pm
A comparison of rare variant candidate search space between long read and short read sequencing and the impact of variant quality criteria on detection of clinically reported variants
Omics Technologies
Collaborators: Children's Hospital of Philadelphia, Bay Institute +2 more
Clinical testingExome/genome sequencingLong-read sequencingSequencing technology
Poster
Thu Oct 22
4:15 pm
A digital platform for education, pre-test counseling, and consent for rapid genome sequencing
Genetic Counseling, ELSI, and Education
Collaborators: Seattle Children's Hospital, Brotman Baty Institute
Exome/genome sequencingGenetic counselingGenetic testing
Lindström Labresearch.fredhutch.org/lindstroem/en.html
Dry lab~7 people
Analyzes GWAS, sequence data and summary statistics from dbGaP and UK Biobank. Studies shared genetic origins of cancer and gene-environment effects on disease risk.
43 papers since 2024
Genetic risk, health-associated lifestyle, and risk of early-onset total cancer and breast cancer
JNCI Journal of the National Cancer Institute, 2024
Development of a Breast Cancer Risk Prediction Model Integrating Monogenic, Polygenic, and Epidemiologic Risk
Cancer Epidemiology Biomarkers & Prevention, 2024
A study protocol of the effectiveness of the Attempted Suicide Short Intervention Program (ASSIP) for recent suicide attempters: a randomized controlled trial
BMC Psychiatry, 2024
Source: OpenAlex author A5102788236
Funded by Not stated, Not stated +1 more
Not stated, R01CA194393 · active
The NIH's standard multi-year research project grant.
“genetic risk factors for cancer and mammographic density (R01CA194393, R01CA244670)”
Not stated, R01CA244670 · active
The NIH's standard multi-year research project grant.
“genetic risk factors for cancer and mammographic density (R01CA194393, R01CA244670)”
Not stated, R01DA047045 · active
The NIH's standard multi-year research project grant.
“genetics underlying a range of outcomes in people living with HIV (R01DA047045)”
Source: lab pages
7 platforms and techniques
Analyzes
GWAS data, Sequence data, Summary statistics
Techniques
Mendelian randomization, Gene-environment interaction studies, Cross-cancer fine-mapping, Genome-wide association studies
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
Genome-wide and local genetic correlation across breast, colorectal, and prostate cancers
Cancer
Collaborators: Fred Hutch Cancer Center
Genetic epidemiologyCancer
Poster
Fri Oct 23
2:30 pm
Identifying shared and distinct biology across cancers using pathway-based polygenic risk scores
Cancer
Collaborators: Fred Hutch Cancer Center
Polygenic risk scoreCancerGenome-wide association studyGenetic epidemiology
Poster
Fri Oct 23
2:30 pm
Assessing gene-environment interactions in the relationships between tobacco smoking, leukocyte telomere length, and smoking-related cancers
Cancer
Collaborators: Fred Hutch Cancer Center
CancerComplex traitsGene environment interactionGenetic epidemiology
Stergachis Labstergachislab.org
Wet + dry lab~20 people
Develops Fiber-seq with m6A-MTases and PacBio circular consensus sequencing for chromatin and epigenome profiling. Applies patient-specific epigenetic data to rare genetic conditions and clinical genomics.
80 papers since 2024
ACMG SF v3.3 list for reporting of secondary findings in clinical exome and genome sequencing: A policy statement of the American College of Medical Genetics and Genomics (ACMG)
Genetics in Medicine, 2025
The Somatic Mosaicism across Human Tissues Network
Nature, 2025
Single-nucleoid architecture reveals heterogeneous packaging of mitochondrial DNA
Nature Structural & Molecular Biology, 2024
Source: OpenAlex author A5070469338
9 platforms and techniques
Runs
Fiber-seq, DNA N6-adenine methyltransferases (m6A-MTases), PacBio circular consensus sequencing, DAF-seq
Techniques
Chromatin accessibility mapping, Transcription-factor occupancy mapping, Nucleosome occupancy mapping, DNA-m6A calling, Primary patient samples
Source: lab pages
Currently hiring
“Open Post-doc and Graduate student positions.”
Source: lab positions page
No funding stated
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
A telomere-to-telomere map of somatic mutation burden
Cancer
Collaborators: Stanford University, Seattle Children's Research Institute +3 more
Somatic variantsLong-read sequencingCancerChromosomal abnormalities
Symposium
Fri Oct 23
8:50 am
Talk
Fri Oct 23
11:15 am
Somatic chromatin epimutations cap genetic determinism in the human diploid chromatin epigenome
New Methods for Detecting Clonal Hematopoiesis and Somatic Variation Across Scales
Collaborators: University of Utah, Seattle Children's Research Institute +1 more
HaplotypeEpigeneticsGene regulationGenomics
Miller Labmillerlaboratory.com
Wet + dry lab~13 people
Uses ONT and PacBio long-read DNA/RNA sequencing for Mendelian disease, methylation and structural-variation analysis. Works with the 1000 Genomes Project and clinical cases.
26 papers since 2024
Are family firms green?
Small Business Economics, 2024
CEO Religion and Corporate Social Responsibility: A Socio-behavioral Model
Journal of Business Ethics, 2024
The role of culture in family firms
Small Business Economics, 2024
Source: OpenAlex author A5080734771
Funded by NIH, SUDC Foundation +2 more
NIH, U24 · active
“NIH U24 funded”
SUDC Foundation, SUDC Foundation grant · 4-year
“Danny and Dr. [name] have been awarded a 4-year SUDC Foundation grant.”
NIH, Director’s Early Independence Award (DP5) · active
“selected for an NIH Director’s Early Independence Award (DP5)”
+1 more on the lab page
Source: lab pages
14 platforms and techniques
Runs
Oxford Nanopore Technologies (ONT) platform, PromethION, PacBio, Direct RNA sequencing, Targeted genome sequencing / adaptive sampling, SQK-LSK114 ligation library preparation, SQK-RNA004 direct RNA library preparation, QIAsymphony DSP DNA Midi Kit
Techniques
Long-read DNA and RNA sequencing, Methylation calling, Structural-variant discovery and prioritization, Repeat-expansion detection, Fibroblast and lymphoblastoid cell culture, Variant calling and phasing
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Long read sequencing for improved methylation classification of Mendelian conditions
Epigenomics
ChromatinLong-read sequencingMachine learningMendelian disorder
Talk
Thu Oct 22
8:30 am
Haplotype-resolved structural variation and functional consequences across ancestrally diverse human populations
The Long and Short of It: Long-Read Genomics from Biobanks to the Clinic
Collaborators: Johns Hopkins University, Seattle Children's Research Institute +3 more
Long-read sequencingMulti-omicsLarge-scale biobanks
Bennett Labseattlechildrens.org/research/centers-programs/developmental-biology-regenerative-medicine/labs/bennett-lab
Wet lab~1 people
Uses highly sensitive sequencing for tissue, blood and cfDNA somatic-mutation testing, including VANseq and exome sequencing. Studies vascular malformations, birth defects and craniofacial microsomia.
24 papers since 2024
The Somatic Mosaicism across Human Tissues Network
Nature, 2025
Somatic epimutations cap genetic determinism in the human diploid chromatin epigenome
bioRxiv (Cold Spring Harbor Laboratory), 2024
Deaminase-assisted single-molecule and single-cell chromatin fiber sequencing
bioRxiv (Cold Spring Harbor Laboratory), 2024
Source: OpenAlex author A5026545795
Funded by National Institutes of Health, NIH
National Institutes of Health, SMaHT (Somatic Mosaicism across Human Tissues) Network · 2023; 5-year
“received a 5-year, $12.5 million grant from the National Institutes of Health as part of the SMaHT (Somatic Mosaicism across Human Tissues) Network”
NIH, Common Fund · active
“The project is funded by the NIH’s Common Fund.”
Source: lab pages
11 platforms and techniques
Runs
VANseq clinical sequencing panel, Tissue-based somatic-mutation testing, Blood-based somatic-mutation testing, cfDNA-based somatic-mutation testing, DNA sequencing, RNA sequencing
Techniques
Low-level mosaic-variant detection, Highly sensitive genetic sequencing, Retrospective chart review, Cell-free DNA testing, Exome sequencing
Source: lab pages
No openings posted
Symposium
Wed Oct 21
8:40 am
Using fibroblast-derived donor specific assemblies to call somatic mutation in a haplotype-resolved manner- an example of what you can do with a biobank
Unique Considerations for Deceased Human Donor Tissue Biobanks to Support Innovative Genomic Studies
Talk
Fri Oct 23
2:15 pm
Identification of somatic mutations in surgically resected tissues from individuals with craniofacial microsomia (CFM)
Decoding Malformation Syndromes: New Disease Genes Across Organ Systems
Collaborators: Seattle Children's Research Institute, University of Utah
Somatic variantsMosaicismMalformationGenetic variation
Genetic Analysis Centerbiostat.washington.edu/research/centers/gac
Dry lab~24 people
Develops statistical methods for WGS, GWAS and SNP data. Supports large-scale genomics consortia including GREGoR, PRIMED and ADSP.
17 papers since 2024
Sequencing in over 50,000 cases identifies coding and structural variation underlying atrial fibrillation risk
Nature Genetics, 2025
GREGoR: accelerating genomics for rare diseases
Nature, 2025
Enteral protein supplementation in critically ill trauma and surgical patients: A single-center randomized clinical trial
The Journal of Trauma: Injury, Infection, and Critical Care, 2025
Source: OpenAlex author A5065342208
Funded by NHGRI GREGoR Consortium, NIH PRIMED Consortium +2 more
NHGRI GREGoR Consortium, Genomics Research to Elucidate the Genetics of Rare diseases · active
“Data Coordinating Center for the NHGRI Genomics Research to Elucidate the Genetics of Rare diseases (GREGoR) Consortium”
NIH PRIMED Consortium, Polygenic Risk Methods Development · active
“Coordinating Center for both the NIH Polygenic Risk Methods Development (PRIMED) Consortium”
NIH, Predoctoral Training in Statistical Genetics
“Predoctoral Training in Statistical Genetics (NIH Training Grant)”
+1 more on the lab page
Source: lab pages
9 platforms and techniques
Analyzes
AnVIL, BioData Catalyst powered by Seven Bridges, TOPMed imputation server
Techniques
WGS data analysis, GWAS, Genetic ancestry inference, PCA and ADMIXTURE, Genotype imputation, Polygenic risk scores
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Genome-wide association study of structural variants with hematologic traits in the All Of Us Program
Complex Traits and Polygenic Disorders
Collaborators: University of Minnesota, University of Michigan +4 more
Complex traitsCopy number/structural variationGenome-wide association studyHematopoietic system
Poster
Fri Oct 23
2:30 pm
Building an Interoperable Rare Disease Multi-omic Resource: The GREGoR Data Model and Dataset
Mendelian Phenotypes
Collaborators: University of California, Irvine, Broad Institute +4 more
GenomicsMendelian disorderMulti-omics
Comparative Health Outcomes, Policy, and Economics (CHOICE) Institutesop.washington.edu/choice
Dry lab~30 people
Analyzes Medicare Part B claims, Open Payments Data and genomic information with decision models, policy evaluation, health economics and statistics. Informs health-care and pharmaceutical policy.
20 papers since 2024
LncRNA JINR1 regulates miR-216b-5p/ GRP78 and miR-1-3p/ DDX5 axis to promote JEV infection and cell death
Journal of Virology, 2025
Short-chain fatty acids abrogate Japanese encephalitis virus-induced inflammation in microglial cells via miR-200a-3p/ZBTB20/IKβα axis
mBio, 2024
Prophylactic Administration of Gut Microbiome Metabolites Abrogated Microglial Activation and Subsequent Neuroinflammation in an Experimental Model of Japanese Encephalitis
ACS Chemical Neuroscience, 2024
Source: OpenAlex author A5075526464
Funded by Institute for Clinical and Economic Review, UW CHOICE Health Tech Fund +5 more
Institute for Clinical and Economic Review, ICER Economic Modeling · 01/01/2026 – 12/31/2027
“ICER Economic Modeling. 01/01/2026 – 12/31/2027. Carlson (PI), Role: PI. Institute for Clinical and Economic Review.”
UW CHOICE Health Tech Fund, Estimating Savings and Spillover Effects from the IRA · 2025-2027
“Grant Awarded: Sullivan SD. Principal Investigator – Estimating Savings and Spillover Effects from the IRA. UW CHOICE Health Tech Fund. 2025-2027”
University of Washington Population Health Initiative, Tier 3 Pilot Research Grant · August 2025 – January 2027
“Population Health Initiative (PHI)-University of Washington. August 2025 – January 2027. Co-principal investigator.”
+4 more on the lab page
Source: lab pages
10 platforms and techniques
Techniques
decision modeling, policy evaluation, health economics, statistics, causal inference, machine learning, simulation modeling, value of information analysis, systematic reviews of evidence, real-world data methods
Source: lab pages
No openings posted
Talk
Wed Oct 21
1:51 pm
Cost-effectiveness of mono- and polygenic risk-guided breast cancer screening in the US
Advancing Precision Oncology with AI, Functional Genomics, and Multi-Omics: From Risk Prediction to Tumor Evolution and Therapeutic Discovery
Collaborators: Vanderbilt University, Geisinger College of Health Sciences
Genetic testingCancerPolygenic risk scoreMathematical modeling
Poster
Thu Oct 22
4:15 pm
★ Reviewers’ Choice
Cost-effectiveness of mono- and polygenic risk-guided breast cancer screening in the US
Cancer
Collaborators: Vanderbilt University, Geisinger College of Health Sciences
CancerGenetic testingMathematical modelingPolygenic risk score
BAT Lab - Saturation Genome Editingbrotmanbaty.org/about/staff
Wet + dry lab~7 people
Runs sci-RNA-seq3 and sci-ATAC-seq3 with tissue dissociation, nuclei isolation and bioinformatics. Supports single-cell atlases and Seattle Hub projects with UW, Allen Institute and CZI.
Funded by National Institutes of Health, National Human Genome Research Institute +2 more
National Institutes of Health, Human Bio-Molecular Atlas Program · active
“The National Institutes of Health’s Human Bio-Molecular Atlas Program”
National Human Genome Research Institute · active
“the National Human Genome Research Institute”
Chan-Zuckerberg Initiative · active
“the Chan-Zuckerberg Initiative”
+1 more on the lab page
Source: lab pages
10 platforms and techniques
Runs
sci-RNA-seq3, sci-ATAC-seq3
Techniques
single-cell combinatorial indexing, tissue dissociation, nuclei isolation, Monocle3, Garnett, organoids, zebrafish, xenografts
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Saturation Genome Editing reveals the functional impact of RAD51D and XRCC2 variants
Cancer
Collaborators: University of Pennsylvania, Cedars-Sinai Medical Center +3 more
CancerGenetic variationGenome editing/CRISPRVariant interpretation
BAT Lab - Single Cell Teambrotmanbaty.org/about/staff
Wet + dry lab~7 people
Runs sci-RNA-seq3 and sci-ATAC-seq3 with tissue dissociation, nuclei isolation and bioinformatics. Supports single-cell atlases and Seattle Hub projects with UW, Allen Institute and CZI.
Funded by National Institutes of Health, National Human Genome Research Institute +2 more
National Institutes of Health, Human Bio-Molecular Atlas Program · active
“The National Institutes of Health’s Human Bio-Molecular Atlas Program”
National Human Genome Research Institute · active
“the National Human Genome Research Institute”
Chan-Zuckerberg Initiative · active
“the Chan-Zuckerberg Initiative”
+1 more on the lab page
Source: lab pages
10 platforms and techniques
Runs
sci-RNA-seq3, sci-ATAC-seq3
Techniques
single-cell combinatorial indexing, tissue dissociation, nuclei isolation, Monocle3, Garnett, organoids, zebrafish, xenografts
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
Saturation Genome Editing of PALB2 reveals the functional impact of 12,855 variants
Molecular Effects of Genetic Variation
Collaborators: Baylor College of Medicine
CancerGenetic variation
Blue Labdrlizblue.org
Dry lab~5 people
Analyzes genome sequencing, proteomics, transcriptomics and genotype data with population genetics and genetic epidemiology methods. Works with ADSP, CMGs, GREGoR and the Pacific Northwest UDN.
54 papers since 2024
Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition
Nature Genetics, 2025
Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans
The Journal of Experimental Medicine, 2024
Advancements in APOE and dementia research: Highlights from the 2023 AAIC Advancements: APOE conference
Alzheimer s & Dementia, 2024
Source: OpenAlex author A5007026657
12 platforms and techniques
Analyzes
single-molecule chromatin fiber sequencing, multiplexed arrays isoform sequencing, genome sequencing, proteomics
Techniques
linkage analysis, identity-by-descent analysis, genome-wide association studies, admixture mapping, variant prioritization, transcriptomics data integration, genotype imputation, sequence analysis
Source: lab pages
No funding stated · No openings posted
Poster
Wed Oct 21
2:30 pm
Local-ancestry effects on the relationship between APOE variation and lipids and inflammatory markers
Complex Traits and Polygenic Disorders
Collaborators: University of Michigan, Vanderbilt University +1 more
Genetic epidemiologyHaplotypePopulation structurePrecision medicine
Center for Clinical and Translational Researchseattlechildrens.org/research/centers-programs/clinical-and-translational-research
Wet + dry lab~210 people
Uses clinical and research informatics with EHR, imaging and genomic data. Improves pediatric care through clinical trials, precision medicine and learning health systems.
20 papers since 2024
A Conceptual Thematic Framework of Psychological Adjustment in Caregivers of Children with Craniofacial Microsomia
The Cleft Palate-Craniofacial Journal, 2024
Early Experiences of Parents of Children With Craniofacial Microsomia
Journal of Obstetric, Gynecologic & Neonatal Nursing, 2024
“I can't provide what my child needs”: Early feeding experiences of caregivers of children with craniofacial microsomia
Journal of Pediatric Nursing, 2024
Source: OpenAlex author A5090977864
Funded by Center for Clinical and Translational Research, Center for Clinical and Translational Research +2 more
Center for Clinical and Translational Research, Faculty Research Support Fund · active
“The Faculty Research Support Fund offers in-kind support to CCTR investigators”
Center for Clinical and Translational Research, Pediatric Pilot Funds · active
“The Pediatric Pilot Funds is a competitive program that supports investigators initiating proof of concept testing”
Institute of Translational Health Sciences, Early-Stage Product Development Award · active
“Early-Stage Product Development Award”
+1 more on the lab page
Source: lab pages
6 platforms and techniques
Analyzes
Electronic health record (EHR)
Techniques
Bench research, Clinical trials, Implementation studies, Clinical and research informatics, Clinical, imaging and genomic data integration
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
The Diagnostic Yield and Added Value of Genome Sequencing as a First-Line and Sequential Genetic Test in 1,000 Pediatric Outpatients
Laboratory Genetics and Genomics
Clinical geneticsClinical testingExome/genome sequencingGenomics
Eichler Labeichler.gs.washington.edu
Dry lab~27 people
Analyzes SMRT and Oxford Nanopore long-read data for structural-variant discovery, phasing and genome assembly. Applies methods to human disease, primate evolution and 1000 Genomes datasets.
111 papers since 2024
Complete sequencing of ape genomes
Nature, 2025
Genomic data in the All of Us Research Program
Nature, 2024
The variation and evolution of complete human centromeres
Nature, 2024
Source: OpenAlex author A5014870107
Funded by Howard Hughes Medical Institute, NIH +4 more
Howard Hughes Medical Institute, Investigator · 2005-2028
“Howard Hughes Medical Institute Investigator (2005-2028) Eichler, EE.”
NIH, R01HG010169 · 2018-2028
The NIH's standard multi-year research project grant.
“NIH (R01HG010169) Sequence-resolved structural variation of human genomes. (2018-2028)”
Simons Foundation, SFI-AN-AR-Sex Differences-00017956-02 · 2026-2028
“Simons Foundation (SFI-AN-AR-Sex Differences-00017956-02) Genetic and molecular dissection of autism sex differences. (2026-2028)”
+3 more on the lab page
Source: lab pages
6 platforms and techniques
Analyzes
SMRT sequencing platforms, Oxford Nanopore
Techniques
Telomere-to-telomere genome assembly, Structural-variant discovery and phasing, De novo genome assembly, Comparative primate genomics
Source: lab pages
Currently hiring
“Postdocs are hired on a rolling basis.”
Source: lab positions page
Poster
Wed Oct 21
2:30 pm
Donor-specific assemblies enhance somatic structural variant detection across human tissues
Molecular Effects of Genetic Variation
Collaborators: Seattle Children's Research Institute
Somatic variants
Genetic Analysis Center (GAC)biostat.washington.edu/research/centers/gac
Dry lab~24 people
Develops statistical methods for WGS, GWAS and SNP data. Supports large-scale genomics consortia including GREGoR, PRIMED and ADSP.
17 papers since 2024
Sequencing in over 50,000 cases identifies coding and structural variation underlying atrial fibrillation risk
Nature Genetics, 2025
GREGoR: accelerating genomics for rare diseases
Nature, 2025
Enteral protein supplementation in critically ill trauma and surgical patients: A single-center randomized clinical trial
The Journal of Trauma: Injury, Infection, and Critical Care, 2025
Source: OpenAlex author A5065342208
Funded by NHGRI GREGoR Consortium, NIH PRIMED Consortium +2 more
NHGRI GREGoR Consortium, Genomics Research to Elucidate the Genetics of Rare diseases · active
“Data Coordinating Center for the NHGRI Genomics Research to Elucidate the Genetics of Rare diseases (GREGoR) Consortium”
NIH PRIMED Consortium, Polygenic Risk Methods Development · active
“Coordinating Center for both the NIH Polygenic Risk Methods Development (PRIMED) Consortium”
NIH, Predoctoral Training in Statistical Genetics
“Predoctoral Training in Statistical Genetics (NIH Training Grant)”
+1 more on the lab page
Source: lab pages
9 platforms and techniques
Analyzes
AnVIL, BioData Catalyst powered by Seven Bridges, TOPMed imputation server
Techniques
WGS data analysis, GWAS, Genetic ancestry inference, PCA and ADMIXTURE, Genotype imputation, Polygenic risk scores
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Establishing a Coordinating Center to enhance collaboration and communication in the Alzheimer’s Disease Sequencing Project (ADSP)
Complex Traits and Polygenic Disorders
Collaborators: Boston University, Allen Institute
Alzheimer’s diseaseStatistical genetics
Gray Labobgyn.uw.edu/research/mfm-research
~5 people
Uses genetics to improve non-invasive prenatal screening and study adverse pregnancy outcomes. Focuses on stillbirth, preeclampsia and fetal anomalies.
57 papers since 2024
Risk of Autism after Prenatal Topiramate, Valproate, or Lamotrigine Exposure
New England Journal of Medicine, 2024
Placental senescence pathophysiology is shared between peripartum cardiomyopathy and preeclampsia in mouse and human
Science Translational Medicine, 2024
Genetic Associations of Circulating Cardiovascular Proteins With Gestational Hypertension and Preeclampsia
JAMA Cardiology, 2024
Source: OpenAlex author A5005129143
2 platforms and techniques
Techniques
non-invasive prenatal screening, prenatal genetic screening and diagnosis
Source: lab pages
No funding stated · No openings posted
Poster
Fri Oct 23
2:30 pm
Preterm preeclampsia GWAS of 12,793 genomes from the TOPMed BCC-PREG and nuMoM2b-HHS cohorts identifies a novel risk locus and shared genetic architecture with cardiometabolic disease
Prenatal, Perinatal, Reproductive, and Developmental Genetics
Collaborators: Massachusetts General Hospital, Broad Institute +3 more
Reproductive geneticsWomen's healthLarge-scale biobanksExome/genome sequencing
Institute for Public Health Geneticsiphg.biostat.washington.edu
~63 people
Uses whole-genome sequencing, nanopore sequencing and multiomic profiling in genetic epidemiology. Trains students to apply genomics to population health, ethics, law and policy.
9 platforms and techniques
Analyzes
Whole-genome sequencing, Multiomic profiling
Techniques
Genetic epidemiology, Statistical genetics, Bioinformatics, Machine learning, Genetic linkage analysis, 3D microphysiological systems, Long-read genome sequencing
Source: lab pages
No funding stated · No openings posted
Poster
Wed Oct 21
2:30 pm
Dissecting T-cell mediated mechanisms of action for aspirin chemoprevention of colorectal cancer
Cancer
Collaborators: Massachusetts General Hospital, Cleveland Clinic +1 more
CancerSingle-cellPrecision medicineGastrointestinal system
Jayadev Labjayadevlab.net
Wet + dry lab~9 people
Studies neurodegeneration using human cellular models, genomics and multiomic analyses of human brain tissues. Focuses on Alzheimer’s disease, microglia and neuro-immune mechanisms.
67 papers since 2024
Safety and efficacy of long-term gantenerumab treatment in dominantly inherited Alzheimer's disease: an open-label extension of the phase 2/3 multicentre, randomised, double-blind, placebo-controlled platform DIAN-TU trial
The Lancet Neurology, 2025
Integrated multimodal cell atlas of Alzheimer’s disease
Nature Neuroscience, 2024
APOE loss-of-function variants: Compatible with longevity and associated with resistance to Alzheimer’s disease pathology
Neuron, 2024
Source: OpenAlex author A5062613069
4 platforms and techniques
Techniques
multiomic analyses, human induced pluripotent stem cell (iPSC) models, transcriptomics, bioinformatic approaches
Source: lab pages
No funding stated · No openings posted
Poster
Fri Oct 23
2:30 pm
Endolysosomal genetic risk shapes microglial states and lysosomal dysfunction in Alzheimer’s disease
Molecular Effects of Genetic Variation
Collaborators: University of California San Diego
Alzheimer’s diseaseGenetic variationImmune systemPolygenic risk score
Sakaue Labsaorisakaue.github.io/team
Dry lab~7 people
Develops statistical methods for 10X Multiome RNA/ATAC, whole-genome and biobank data. Uses them to map disease alleles and predict polygenic risk, especially for immune dysfunction.
33 papers since 2024
Trans-ancestry genome-wide study of depression identifies 697 associations implicating cell types and pharmacotherapies
Cell, 2025
Granzyme K activates the entire complement cascade
Nature, 2025
Multi-ancestry genome-wide association study of major depression aids locus discovery, fine mapping, gene prioritization and causal inference
Nature Genetics, 2024
Source: OpenAlex author A5064515889
12 platforms and techniques
Analyzes
10X Multiome RNA/ATAC, ATAC-seq, Single-cell or nucleus multimodal RNA sequencing and ATAC sequencing, Whole-genome sequences
Techniques
Statistical genetics, Single-cell multi-omics, HLA imputation, Haplotype phasing, HLA fine-mapping, KIR genotyping, Genome-wide association studies, Polygenic risk scores
Source: lab pages
Currently hiring
“Our lab is accepting rotation graduate students anytime after Fall 2025!”
Source: lab positions page
No funding stated
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
Haplotype-resolved references of the large and recurrent 17q21.31 human inversion highlight population diversity, selection signatures, and disease associations
Evolutionary and Population Genetics
Collaborators: University of California, Berkeley
Genome-wide association studyCopy number/structural variationPopulation geneticsAncient DNA
Sakaue Lab @ Genome Sciences, UWsaorisakaue.github.io
Dry lab~7 people
Develops statistical methods for 10X Multiome RNA/ATAC, whole-genome sequences and genotyping microarray data. Studies how genetic variations affect disease susceptibility.
33 papers since 2024
Trans-ancestry genome-wide study of depression identifies 697 associations implicating cell types and pharmacotherapies
Cell, 2025
Granzyme K activates the entire complement cascade
Nature, 2025
Multi-ancestry genome-wide association study of major depression aids locus discovery, fine mapping, gene prioritization and causal inference
Nature Genetics, 2024
Source: OpenAlex author A5064515889
Funded by National Institutes of Health
National Institutes of Health, R01AR063759; U01HG012009; UC2AR081023 · active
The NIH's standard multi-year research project grant.
“This work is supported in part by funding from the National Institutes of Health (R01AR063759, U01HG012009, UC2AR081023).”
Source: lab pages
11 platforms and techniques
Analyzes
10X Multiome RNA/ATAC, single-cell RNA sequencing, single-cell ATAC sequencing, whole-genome sequences, genotyping microarrays
Techniques
SCENT enhancer–gene mapping, GWAS, HLA imputation, HLA fine-mapping, Polygenic risk scores, KIR genotyping
Source: lab pages
Currently hiring
“Our lab is accepting rotation graduate students anytime after Fall 2025!”
Source: lab positions page
Talk
Thu Oct 22
11:15 am
Resolving the regulatory impact of non-coding disease risk alleles throughout human embryogenesis by single-cell multiomic profiling of advanced stem cell-derived models of post-implantation embryos
Gene Regulatory Networks Across Development, Evolution, and Disease
DevelopmentMulti-omicsSingle-cellVariant interpretation
Starita Labstaritalab.org
Wet + dry lab~23 people
Develops MAVE assays and runs sci-RNA-seq3 and sci-ATAC-seq3 single-cell profiling experiments. Applies them to clinical variant classification and vertebrate embryogenesis models.
70 papers since 2024
MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays
Genome biology, 2025
Deciphering the impact of genomic variation on function
Nature, 2024
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods
Genome biology, 2024
Source: OpenAlex author A5071126761
Funded by NHGRI, NHGRI
NHGRI, Impact of Genomic Variation on Function (IGVF) · active
“Impact of Genomic Variation on Function (IGVF) and Genomics Research to Elucidate the Genetics of Rare diseases (GREGoR) projects, both NHGRI funded”
NHGRI, Genomics Research to Elucidate the Genetics of Rare diseases (GREGoR) · active
“Impact of Genomic Variation on Function (IGVF) and Genomics Research to Elucidate the Genetics of Rare diseases (GREGoR) projects, both NHGRI funded”
Source: lab pages
8 platforms and techniques
Runs
Multiplexed assays of variant effect (MAVE), sci-RNA-seq3, sci-ATAC-seq3
Techniques
Saturation Genome Editing, Single-cell combinatorial indexing, Nuclei isolation, Zebrafish embryos, Mouse and human gastruloids
Source: lab pages
Currently hiring
“The Starita Lab is currently accepting graduate students and postdocs.”
Source: lab positions page
Symposium
Fri Oct 23
8:20 am
Coding variants: Experimental and predictive evidence to re-classify variants of unknown significance
The IGVF Consortium: Deciphering the Impact of Genomic Variation on Genome Function
Valdmanis Labsites.google.com/view/valdmanislab
Wet + dry lab~8 people
Studies tandem repeats and RNA using long-read, whole-genome and synaptosome sequencing. Develops AAV gene therapy and CRISPR/Cas9 approaches for ALS, Alzheimer’s disease and liver cancer.
16 papers since 2024
The MUC19 gene: An evolutionary history of recurrent introgression and natural selection
Science, 2025
Structural and genetic diversity in the secreted mucins MUC5AC and MUC5B
The American Journal of Human Genetics, 2024
TREM2 variants that cause early dementia and increase Alzheimer’s disease risk affect gene splicing
Brain, 2024
Source: OpenAlex author A5067591489
Funded by Huntington's Disease Foundation, Mary Gates Research Scholarship +7 more
Huntington's Disease Foundation, Postdoctoral fellowship · 7/1/26
“a post-doctoral fellowship from the Huntington's Disease Foundation”
Mary Gates Research Scholarship · 12/10/25
“is awarded a Mary Gates Research Scholarship”
NINDS, D-SPAN K00 · 6/1/23
“a D-SPAN K00 from NINDS”
+6 more on the lab page
Source: lab pages
10 platforms and techniques
Works with
Long-read sequencing, Whole-genome sequence analysis, Synaptosome RNA sequencing, High-throughput shRNA and microRNA sequencing
Techniques
Tandem repeat expansion analysis, CRISPR/Cas9, Recombinant AAV gene delivery, RNA interference and shRNA delivery, Synaptosomes, PheWAS
Source: lab pages
Currently hiring
“Interested post-doctoral candidates are encouraged to send their CV and contact information for references to [name]”
Source: lab positions page
Talk
Fri Oct 23
2:00 pm
Somatic deletions in the brain preserve the reading frame of APOE in Alzheimer’s disease
New Insights into the Genetic Basis of Neurodegenerative Conditions
Alzheimer’s diseaseGenetic instabilityGenomic structureLong-read sequencing
Wijsman Groupfaculty.washington.edu/wijsman
Dry lab
Develops quantitative methods for human genetic data, including sequence data, pedigree data and dense genetic markers. Applies them to gene mapping, inheritance and genetic epidemiology.
13 papers since 2024
White Matter Abnormalities and Cognition in Aging and Alzheimer Disease
JAMA Neurology, 2025
Multi-ancestry genome-wide meta-analysis of 56,241 individuals identifies known and novel cross-population and ancestry-specific associations as novel risk loci for Alzheimer’s disease
Genome biology, 2025
Key variants via the Alzheimer's Disease Sequencing Project whole genome sequence data
Alzheimer s & Dementia, 2024
Source: OpenAlex author A5003873348
9 platforms and techniques
Analyzes
whole-genome sequencing, whole-exome sequencing
Techniques
gene mapping, haplotyping, identity-by-descent analysis, genotype imputation, Markov chain Monte Carlo, admixture mapping, polygenic risk scores
Source: lab pages
No funding stated · No openings posted
Poster
Thu Oct 22
4:15 pm
Misclassification of high‑risk Individuals by ancestry-standardized polygenic risk scores Is correlated with unmodelled genetic diversity of GWAS source samples
Statistical Genetics and Genetic Epidemiology
Polygenic risk scoreComplex diseasesComplex traitsGenetic testing
Pej Labpejlab.org
Dry lab~10 people
Builds statistical and machine-learning models for RNA sequencing, long-read, spatial and single-cell sequencing data. Applies them to regulatory genomics, rare disease and complex-trait genetics.
15 papers since 2024
Improved multiancestry fine-mapping identifies cis-regulatory variants underlying molecular traits and disease risk
Nature Genetics, 2025
A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats
Cell Genomics, 2024
Haplotype-aware modeling of cis-regulatory effects highlights the gaps remaining in eQTL data
Nature Communications, 2024
Source: OpenAlex author A5009782162
13 platforms and techniques
Analyzes
RNA sequencing, long-read sequencing, spatial transcriptomics, single-cell sequencing, allelic expression (AE)
Techniques
statistical machine learning, probabilistic modeling, mechanistic regulatory modeling, GWAS, eQTL and single-cell eQTL analysis, RNA phenotyping, deep learning and foundation models, TWAS and colocalization
Source: lab pages
No funding stated · No openings posted
UW Center for Rare Disease Research
Works in rare disease.
Talk
Wed Oct 21
1:30 pm
Variants in SFPQ underlie a novel dominant neurodevelopmental syndrome
Clinical Genetics Across the Lifespan: From Gene Discovery to Prenatal, Developmental, and Pharmacogenomic Insights
Collaborators: University of Geneva, Sorbonne Université +16 more
Delineation of diseasesIdentification of disease genesMendelian disorderNeurodevelopmental
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Variants in SFPQ underlie a novel dominant neurodevelopmental syndrome
Mendelian Phenotypes
Collaborators: University of Geneva, Sorbonne Université +16 more
Delineation of diseasesIdentification of disease genesMendelian disorderNeurodevelopmental
Darst Group
Works in cancer genetics.
Poster
Wed Oct 21
2:30 pm
Rare population-specific HOXB13 variants and prostate cancer risk in the All of Us Research Program
Cancer
Collaborators: Yale University, Fred Hutch Cancer Center +1 more
CancerGenetic epidemiologyHaplotypeLarge-scale biobanks
Lin Lab
Works in computational genetics.
Poster
Fri Oct 23
2:30 pm
esVI: A deep learning framework reveals post-translational drivers of RNA-protein discordance in immune and microglial cells from CITE-seq
Artificial Intelligence and Machine Learning
Collaborators: University of Chicago, Icahn School of Medicine at Mount Sinai
Single-cellMulti-omicsImmune systemAlzheimer’s disease

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