Develops statistical and mathematical models for genotype data and genetic studies. Provides predoctoral training through the Genome Science Training Program.
16 papers since 2024
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Genetic drivers of heterogeneity in type 2 diabetes pathophysiology
Nature, 2024
FICTURE: scalable segmentation-free analysis of submicron-resolution spatial transcriptomics
Nature Methods, 2024
Genomic and proteomic evidence for hormonal and metabolic foundations of polycystic ovary syndrome
Generates and analyzes DNA-seq, ATAC-seq, RNA-seq and metabolome data in pancreatic islets, skeletal muscle and adipose. Studies type 2 diabetes regulatory mechanisms.
65 papers since 2024
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Retrograde mitochondrial signaling governs the identity and maturity of metabolic tissues
Science, 2025
Adipose tissue eQTL meta-analysis highlights the contribution of allelic heterogeneity to gene expression regulation and cardiometabolic traits
Nature Genetics, 2025
Human vascularized macrophage-islet organoids to model immune-mediated pancreatic β cell pyroptosis upon viral infection
The NIH's standard multi-year research project grant.
“1 R01 DK129469-01: Multi-omic genetic regulatory signatures underlying tissue complexity of diabetes in the pancreas at single-cell spatial resolution”
NIH, 1 R01 HD105674-01 · 07/2021-06/2026
The NIH's standard multi-year research project grant.
“1 R01 HD105674-01: Single-cell chromatin and transcriptome developmental regulatory mapping of caudal structural birth defects”
NIH, Michigan Integrative Musculoskeletal Health Core Center · 08/2021-07/2026
“Michigan Integrative Musculoskeletal Health Core Center”
Combines Oxford Nanopore long-read sequencing, high-throughput experiments and genomic assays to study regulatory and repetitive variation. Connects genome sequence to molecular mechanism and human disease.
2 papers since 2024
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Transcriptomic analysis to uncover the mechanism of radiosensitization of AR-positive triple-negative breast cancers with AR inhibition
npj Breast Cancer, 2026
A personalized multi‐platform assessment of somatic mosaicism in the human frontal cortex
Studies germ-cell and testis development using single-cell genomics, spatial mapping and genetic lineage tracing. Focuses on spermatogenesis, meiosis, epigenetic inheritance and sperm chromatin.
19 papers since 2024
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Intercellular bridges are essential for transposon repression and meiosis in the male germline
Nature Communications, 2025
Cellular atlas of the human ovary using morphologically guided spatial transcriptomics and single-cell sequencing
Science Advances, 2024
Cellular heterogeneity and dynamics of the human uterus in healthy premenopausal women
Proceedings of the National Academy of Sciences, 2024
RNA FISH, Single-cell, single-allele and single-molecule RNA visualization, Mouse model system, Human embryonic stem cells and rat embryos/stem cells, Epiblast-like cell differentiation, In vivo and in vitro functional dissection
Studies hereditary ataxias using RNA-seq, LC-MS-based lipidomics, iPSC-derived neurons, mouse models, and human tissue or biofluid samples. Develops biomarkers and therapies for SCA3.
8 papers since 2024
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Cerebellar lipid dysregulation in SCA3: A comparative study in patients and mice
Neurobiology of Disease, 2025
ASOs are an effective treatment for disease-associated oligodendrocyte signatures in premanifest and symptomatic SCA3 mice
Molecular Therapy, 2024
Dysregulation of zebrin-II cell subtypes in the cerebellum is a shared feature across polyglutamine ataxia mouse models and patients
Develops computational methods for whole-genome, long-read, nanopore, targeted-capture and whole-genome-amplified single-cell sequencing data. Applies them to somatic variation in human tissues and HPV-associated head-and-neck cancer.
36 papers since 2024
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Complex genetic variation in nearly complete human genomes
Nature, 2025
The Somatic Mosaicism across Human Tissues Network
Nature, 2025
Deciphering the impact of genomic variation on function
Studies obesity and MASLD using GWAS, RNA-seq, lipidomics and UK Biobank data. Builds cellular and mouse models for precision diagnostics and therapeutics.
26 papers since 2024
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Human genetics of metabolic dysfunction–associated steatotic liver disease: from variants to cause to precision treatment
Journal of Clinical Investigation, 2025
Comprehensive genetic study of the insulin resistance marker TG:HDL-C in the UK Biobank
Nature Genetics, 2024
Genetic risk accentuates dietary effects on hepatic steatosis, inflammation and fibrosis in a population-based cohort
Studies human genetic variation using computational analyses, molecular and cellular biology, yeast, worm and mouse systems. Targets aminoacyl-tRNA synthetase disease and SOX10-regulated Schwann-cell biology.
12 papers since 2024
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Recessive, pathogenic AARS1 variants display variable loss-of-function and dominant-negative effects