University of California, San Francisco at ASHG 2026

Oct 20–24, 2026 Montréal, Canada ~7.5k attendees Website

University of California, San Francisco brings 19 presentations from 9 research groups to ASHG 2026 in Montréal. Its program at this meeting centres on rare disease, cancer, and computational and population genetics. Ahituv Lab examines non-coding autism risk with deep learning and reporter assays, Weiss Lab studies genetic pregnancy biomarkers, and Capra Lab seeks therapeutic targets among disease genes.

OrganizationASHG 2026 Attendance
8 PhD Students · 3 PIs · 2 Postdocs · 1 Staff Scientist
Ahituv Labpharm.ucsf.edu/ahituv
Wet + dry lab~16 people
Uses RNA-seq, ChIP-seq, ATAC-seq, single-cell RNA-seq, single-cell ATAC-seq and MPRA with human samples and mouse/fish genetic engineering. Studies regulatory variation in disease, evolution and therapy.
58 papers since 2024
›
Massively parallel characterization of transcriptional regulatory elements
Nature, 2025
Single-cell genomics and regulatory networks for 388 human brains
Science, 2024
Single-cell multi-cohort dissection of the schizophrenia transcriptome
Science, 2024
Source: OpenAlex author A5086687499
16 platforms and techniques
›
Runs
RNA-seq, ChIP-seq, Cut&Tag, ATAC-seq, Hi-C, single cell RNA-seq, single cell ATAC-seq, massively parallel reporter assays (MPRA)
Techniques
saturation mutagenesis, mouse transgenic enhancer assay, CRISPR-mediated activation (CRISPRa), zinc-fingers, TALEs, mouse genetic engineering, fish genetic engineering, stem-cell-to-neuron differentiation
Source: lab pages
No funding stated · No openings posted
Talk
Thu Oct 22
8:30 am
Deep learning and massively parallel reporter assays determine non-coding risk for autism spectrum disorder
Collaborators: Stanford University, Icahn School of Medicine at Mount Sinai +3 more
AutismNeurogeneticsMachine learning
Poster
Fri Oct 23
2:30 pm
Massively parallel characterization of noncoding variants associated with neurodevelopmental disorders
Collaborators: Broad Institute, Boston Children's Hospital +1 more
Variant interpretationNeurodevelopmentalGene regulationDeep learning
Poster
Fri Oct 23
2:30 pm
Integrative single-cell characterization of intervertebral discs and their association with scoliosis
Collaborators: The University of Texas Southwestern Medical Center, The University of Texas at Austin
Bone/joint abnormalitiesGene regulationGenetic variationMulti-omics
Weiss Lablaweisslab.ucsf.edu
Dry lab~6 people
Studies autism using genome-wide association, eQTL, CNV, transcriptomic and clinical data. Uses genetic mechanisms to understand autism risk, sex differences and pregnancy biomarkers.
9 papers since 2024
›
Mapping the genetic landscape across 14 psychiatric disorders
Nature, 2025
Examining Sex Differences in Autism Heritability
JAMA Psychiatry, 2024
Relationship between sex biases in gene expression and sex biases in autism and Alzheimer’s disease
Biology of Sex Differences, 2024
Source: OpenAlex author A5056862358
5 platforms and techniques
›
Techniques
Genome-wide association analyses, eQTL mapping, PrediXcan, MetaXcan, Human iPSC-derived neurons
Source: lab pages
Currently hiring
›
“Autism genetics lab seeking postdoctoral fellow or staff researcher for computational analysis of large datasets.”
Source: lab positions page
No funding stated
Poster
Wed Oct 21
2:30 pm
Genetic Regulation of Metabolic Biomarkers During Pregnancy
Collaborators: University of California, Berkeley, University of California, Davis +1 more
Complex traitsGene environment interactionGenome-wide association studyHeritability
Poster
Wed Oct 21
2:30 pm
GENETIC ASD SUBTYPES DISENTANGLE THE RELATIONSHIP BETWEEN SEX RATIO AND AGE OF DIAGNOSIS
AutismExome/genome sequencingPhenotypeComplex traits
Poster
Fri Oct 23
2:30 pm
Genetic insights into maternal autoantibodies associated with autism
Collaborators: Kaiser Permanente
Genome-wide association studyAutismImmune systemWomen's health
Capra Labcapralab.github.io
Dry lab~10 people
Develops computational and AI methods to interpret genetic variation from whole-genome sequences and biobank-linked EHRs. Applies them to rare disease, human evolution and health.
Funded by NIH, CIRM +3 more
›
NIH, The Evolution of Gene Regulation and Human Disease · 2018-2029
“The Evolution of Gene Regulation and Human Disease, NIH, 2018-2029”
CIRM, Allele Prospector: Leveraging human genetic variation to enable therapeutic genome editing in hundreds of disease genes · 2026-2029
“Allele Prospector: Leveraging human genetic variation to enable therapeutic genome editing in hundreds of disease genes, CIRM, 2026-2029”
NIH, Personalized Structural Biology: Enabling Exome Interpretation in Undiagnosed Diseases · 2021-2025
“Personalized Structural Biology: Enabling Exome Interpretation in Undiagnosed Diseases, NIH, 2021-2025”
+2 more on the lab page
Source: lab pages
9 platforms and techniques
›
Analyzes
ChIP-seq, DNase I hypersensitivity, CAGE
Techniques
machine learning, deep learning, sequence-based machine learning, deep mutational scanning, EHR-based deep phenotyping, protein structure analysis
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Identifying gene expression outliers in recurrent pregnancy loss families using trio genome sequencing and DNA sequence-to-function models
Collaborators: Stanford University
GenomicsIdentification of disease genesMendelian disorderPrenatal diagnosis
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Leveraging human genetic variation to therapeutically target hundreds of genes with dominant & dispensable disease alleles
Collaborators: Gladstone Institutes
Gene therapyGenome editing/CRISPRMendelian disorderMolecular therapeutics
Center for Cerebrovascular Researchccr.ucsf.edu
Wet + dry lab~30 people
Studies brain vascular malformations with cell-free DNA screening, whole methylome sequencing, methylome arrays and imaging data. Uses UCSF cohorts and BVMC studies to identify biomarkers.
58 papers since 2024
›
Guidelines for the Diagnosis and Clinical Management of Cavernous Malformations of the Brain and Spinal Cord: Consensus Recommendations Based on a Systematic Literature Review by the Alliance to Cure Cavernous Malformation Clinical Advisory Board Experts Panel
Neurosurgery, 2025
Somatic mutations in arteriovenous malformations in hereditary hemorrhagic telangiectasia support a bi-allelic two-hit mutation mechanism of pathogenesis
The American Journal of Human Genetics, 2024
Mild Hypoxia Accelerates Cerebral Cavernous Malformation Disease Through CX3CR1-CX3CL1 Signaling
Arteriosclerosis Thrombosis and Vascular Biology, 2024
Source: OpenAlex author A5073116324
Funded by Cindy and Dale Raaen in honor of Allison Noelle Raaen, The Michael Ryan Zodda Foundation for AVM Awareness +5 more
›
Cindy and Dale Raaen in honor of Allison Noelle Raaen · active
“Cindy and Dale Raaen in honor of Allison Noelle Raaen”
The Michael Ryan Zodda Foundation for AVM Awareness · active
“the michael ryan zodda foundation for avm awareness”
Leslie Munzer Neurovascular Research Fund · active
“Leslie Munzer Neurovascular Research Fund”
+4 more on the lab page
Source: lab pages
10 platforms and techniques
›
Works with
cell-free DNA screening, whole methylome sequencing, methylome arrays, MRI
Techniques
animal models, cell biology, human genetics, AAV-vector delivery, blood epigenetic profiling, treatment outcomes research
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
Condello Labcondellolab.ucsf.edu
Wet + dry lab~16 people
Studies glial biology and proteinopathy using Visium ST, single nucleus RNA sequencing and spatial transcriptomics. Research targets Alzheimer’s disease, tau pathology and vulnerable neurons.
31 papers since 2024
›
Type-I-interferon-responsive microglia shape cortical development and behavior
Cell, 2024
Cryo-EM structures reveal tau filaments from Down syndrome adopt Alzheimer’s disease fold
Acta Neuropathologica Communications, 2024
Expanding the Prion Paradigm to Include Alzheimer and Parkinson Diseases
JAMA Neurology, 2024
Source: OpenAlex author A5091904954
Funded by CIRM, NIH +3 more
›
CIRM, UCSF CIRM Scholars Fellowship · 2025
“Emily Graham receives the UCSF CIRM Scholars Fellowship!”
NIH, F31 award · 2025
“Stephanie Huard receives the NIH F31 award!”
NIH, K99/R00 award · 2024
“Yang for receiving the NIH K99/R00 award from the National Institute on Aging!”
+2 more on the lab page
Source: lab pages
15 platforms and techniques
›
Runs
Visium ST, single nucleus RNA sequencing, spatial transcriptomics, metabolomics, confocal microscopy, EMBER, immunohistochemistry
Techniques
immunohistochemistry, confocal microscopy, PCA, UMAP, machine-learning-based clustering, Tg12099 transgenic rat model, CRISPR screens, iPSC-derived neurons
Source: lab pages
Currently hiring
›
“If you are interested in joining our lab, please inquire via email about potential openings!”
Source: lab positions page
Hernandez Labhernandezlab.ucsf.edu
Dry lab~7 people
Analyzes pooled sequencing and RNA-sequencing data with population-genetic simulations. Studies human disease genetics, host-pathogen interactions and the 1000 Genomes Project.
15 papers since 2024
›
Sequencing in over 50,000 cases identifies coding and structural variation underlying atrial fibrillation risk
Nature Genetics, 2025
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods
Genome biology, 2024
Genetics of Latin American Diversity Project: Insights into population genetics and association studies in admixed groups in the Americas
Cell Genomics, 2024
Source: OpenAlex author A5005352234
Funded by NSF
›
NSF, Graduate Research Fellowship · active
“Raul is a graduate student in the Biomedical Sciences Graduate Program and an NSF Graduate Research Fellow.”
Source: lab pages
11 platforms and techniques
›
Analyzes
RNA-sequencing, Pooled sequencing, Population-scale sequencing
Techniques
Population genetic simulations, Population genetic modeling, Background-selection models, Phylogenetic and population genetic techniques, Admixture mapping, EHH, iHS and XP-EHH scans, Forward population-genetic simulation, Rhesus macaque, cows and rice
Source: lab pages
Currently hiring
›
“We are currently seeking excited postdocs and graduate students with experience or a strong desire to learn computational biology”
Source: lab positions page
Torgerson-Hernandez Lab (THeLab)thelab.ucsf.edu
Dry lab~11 people
Studies genetic variation and complex traits using population genetics, statistical modeling and multi-omic data. Focuses on evolution, ancestry, molecular phenotypes and treatment response.
5 platforms and techniques
›
Analyzes
RNA-sequencing
Techniques
population genetics, statistical modeling, bioinformatic analyses, admixture mapping
Source: lab pages
No funding stated · No openings posted
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Data-analysis biases are exacerbating GWAS representation gaps
BioinformaticsEthical, legal, and social implicationsGenome-wide association studyMachine learning
Ziv Labzivlab.ucsf.edu
Dry lab~7 people
Studies cancer susceptibility and treatment response using GWAS, whole-exome sequencing, paired tumor/normal sequencing and RNA-seq. Works with City of Hope on Latina breast-cancer studies.
115 papers since 2024
›
Risk-Based vs Annual Breast Cancer Screening
JAMA, 2025
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods
Genome biology, 2024
Polygenic risk score for ulcerative colitis predicts immune checkpoint inhibitor-mediated colitis
Nature Communications, 2024
Source: OpenAlex author A5057537193
Funded by NCI, NCI +2 more
›
NCI, P20 · 6/2024
“6/2024: We were awarded a P20 by NCI to study health disparities in immuno-oncology”
Marcus Precision Medicine Award · 9/2024
“Elad, Yin Shen and Jennifer Rosenbluth are awarded a Marcus Precision Medicine Award”
NCI · active
“This project is a collaboration with Susan Neuhuasen at City of Hope and funded by NCI.”
+1 more on the lab page
Source: lab pages
8 platforms and techniques
›
Analyzes
Whole exome sequencing (WES), Paired tumor/normal whole exome sequencing, RNA-seq, Targeted sequencing
Techniques
Genome-wide association studies, Genetic admixture, Rare-variant association analysis, Somatic mutation and copy-number analysis
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
GWAS of tumor transposable element expression reveals germline determinants of the tumor immune microenvironment
Collaborators: Beckman Research Institute
CancerExpression quantitative trait lociGenetic epidemiologyGenome-wide association study
Werling Labwerling.genetics.wisc.edu
Works in computational genetics and reproductive and prenatal genetics.
13 papers since 2024
›
A T2T-CHM13 recombination map and globally diverse haplotype reference panel improves phasing and imputation
bioRxiv (Cold Spring Harbor Laboratory), 2025
Whole genome sequencing analysis identifies sex differences of familial pattern contributing to phenotypic diversity in autism
Genome Medicine, 2024
CWAS-Plus: estimating category-wide association of rare noncoding variation from whole-genome sequencing data with cell-type-specific functional data
Briefings in Bioinformatics, 2024
Source: OpenAlex author A5026247494
Poster
Wed Oct 21
2:30 pm
Aligning bulk RNA-seq and WGS reads from developing human brains to T2T-CHM13 uncovers novel gene expression patterns and eQTL associations in coding and non-coding genomic regions
Collaborators: University of Wisconsin–Madison, Yale University +2 more
BioinformaticsGenetic variationNeurodevelopmentalNon-coding RNA
5 more presenters — research group not yet identified

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