ASHG 2026 · Hospital & health system

Hospital for Sick Children at ASHG 2026

Toronto, Ontario

Hospital for Sick Children at ASHG 2026 in Montréal: 42 presentations (37 posters, 3 platform talks, 1 featured symposium); 20 research groups.

42
presentations on the program
20
research groups identified
5
sessions invited to or moderated
2
Reviewers’ Choice abstracts

Explore everyone at ASHG 2026 →

OrganizationASHG 2026 Attendance
Hospital for Sick Children
Toronto, Ontario
15 Staff Scientists · 9 PhD Students · 4 PIs · 2 Postdocs
Centre for Applied Genomicstcag.ca
Wet + dry lab~124 people
Runs Illumina NovaSeq 6000, MiSeq, PacBio Sequel IIe and Oxford Nanopore PromethION; analyzes NGS, microarray and methylation data. Serves academic, commercial and pharmaceutical researchers.
87 papers since 2024
Mapping the genetic landscape across 14 psychiatric disorders
Nature, 2025
Comprehensive whole-genome sequence analyses provide insights into the genomic architecture of cerebral palsy
Nature Genetics, 2024
Chromosome X-wide common variant association study in autism spectrum disorder
The American Journal of Human Genetics, 2024
Source: OpenAlex author A5049296994
Funded by Genome Canada, Ontario Genomics Institute +3 more
Genome Canada, Science and Technology Innovation Centre for Ontario · active
“TCAG serves as the Genome Canada Science and Technology Innovation Centre for Ontario”
Ontario Genomics Institute, OGI-033 · active
“Major funding for The Centre for Applied Genomics is provided by the Government of Canada through Genome Canada and the Ontario Genomics Institute (OGI-033).”
Canada Foundation for Innovation · active
“significant grant support from Genome Canada, the Canada Foundation for Innovation (CFI)”
+2 more on the lab page
Source: lab pages
14 platforms and techniques
Works with
Illumina NovaSeq 6000, Illumina MiSeq, PacBio Sequel IIe, Oxford Nanopore PromethION-24, single-cell RNA-Seq, single-cell ATAC-Seq, RNA-seq, ChIP-seq
Techniques
DNA/RNA library preparation, whole-genome bisulfite sequencing, de-novo genome assembly, rare SNV detection, copy-number variation analysis, genome-wide association analysis
Source: lab pages
No openings posted
Talk
Wed Oct 21
2:19 pm
Rare variants in small nuclear RNA genes reveal a splicing related genetic mechanism in individuals ascertained for autism spectrum disorder
Decoding Genetic Risk Across Ancestry and Sex in Polygenic Disorders
Collaborators: University of Waterloo, Hamad bin Khalifa University +1 more
AutismGenotype-phenotype correlationsNon-coding RNARegulation of transcription
Poster
Thu Oct 22
4:15 pm
★ Reviewers’ Choice
Rare variants in small nuclear RNA genes reveal a splicing related genetic mechanism in individuals ascertained for autism spectrum disorder
Complex Traits and Polygenic Disorders
Collaborators: University of Waterloo, Hamad bin Khalifa University +1 more
AutismGenotype-phenotype correlationsNon-coding RNARegulation of transcription
Poster
Thu Oct 22
4:15 pm
Assessing differential methylation in long-read de novo assemblies and variation graphs
Omics Technologies
Collaborators: University of Toronto
Computational toolsLong-read sequencingMethylationBioinformatics
Poster
Thu Oct 22
4:15 pm
The revised diploid genome sequence of an individual human: an optimized workflow for scaling of near telomere-to-telomere assemblies
Omics Technologies
Collaborators: University of Toronto, J. Craig Venter Institute
Exome/genome sequencingGenetic mappingGenetic variationGenomic structure
Poster
Fri Oct 23
2:30 pm
Incorporating amino acid molecular features into language model training to enhance missense variant effect prediction in intrinsically disordered regions of proteins
Artificial Intelligence and Machine Learning
Collaborators: University of Toronto, University of Waterloo
Artificial intelligenceAutismGenomicsMachine learning
Poster
Fri Oct 23
2:30 pm
Whole-genome sequence analysis of 348 families expands the genomic contribution of common and rare variants to cerebral palsy
Complex Traits and Polygenic Disorders
Collaborators: Centre for Applied Genomics, Universidade Federal de Minas Gerais +4 more
GenomicsGenome-wide association studyGenetic variationExome/genome sequencing
Poster
Fri Oct 23
2:30 pm
Multidimensional Spatiotemporal and Dosage Contexts of Shared Biological Pathways in Six Psychiatric Disorders.
Complex Traits and Polygenic Disorders
Collaborators: Centre for Applied Genomics, Université de Montréal +1 more
AutismPsychiatric geneticsCopy number/structural variationNeurodevelopmental
Costain Lablab.research.sickkids.ca/costain
Dry lab~13 people
Uses genome sequencing to diagnose children with undiagnosed genetic disease. Interprets rare variation for epilepsy, medical complexity and precision therapy development.
65 papers since 2024
Comprehensive whole-genome sequence analyses provide insights into the genomic architecture of cerebral palsy
Nature Genetics, 2024
Evidence review and considerations for use of first line genome sequencing to diagnose rare genetic disorders
npj Genomic Medicine, 2024
A pseudoautosomal glycosylation disorder prompts the revision of dolichol biosynthesis
Cell, 2024
Source: OpenAlex author A5050099013
Funded by Canadian Institutes of Health Research, Research Training Centre
Canadian Institutes of Health Research · active
“Canadian Institutes of Health Research”
Research Training Centre, Restracomp · active
“Research Training Centre | Restracomp”
Source: lab pages
5 platforms and techniques
Analyzes
Genome sequencing
Techniques
Rare genetic-variation classification and interpretation, Sequencing variant-data analysis, Pharmacogenetic testing, Antisense oligonucleotide eligibility assessment
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Population-scale prioritization of common heterozygous SNPs for allele-specific antisense oligonucleotide therapy design
Genetic Therapies and Precision Medicine
Collaborators: University of Toronto
Molecular therapeuticsPrecision medicinePopulation geneticsSNP analysis/discovery
Poster
Wed Oct 21
2:30 pm
Implementing institution-wide programs for the proactive identification and accelerated testing of genetic variants amenable to antisense oligonucleotide treatments
Genetic Therapies and Precision Medicine
Collaborators: Centre Hospitalier Universitaire Sainte-Justine
Clinical geneticsGene therapyMolecular therapeuticsPrecision medicine
Talk
Thu Oct 22
2:00 pm
Gene-STEPS: Rapid genome sequencing improves diagnostic yield and management for infants with epilepsy
Lessons from Real-World Clinical Sequencing Across Neurodevelopmental, Neurological, and Movement Disorders
Collaborators: University of Toronto
Clinical testingEpilepsyExome/genome sequencingLong-read sequencing
Poster
Thu Oct 22
4:15 pm
Systematic identification of rare splice-disrupting deep intronic variants for targeted antisense oligonucleotide design
Molecular Effects of Genetic Variation
Collaborators: University of Toronto
Splicing mechanismsVariant interpretationRare variantsRNA-seq
Talk
Fri Oct 23
11:45 am
Genome-wide tandem repeat expansions in regulatory regions contribute to epilepsy risk
New Tricks for Tackling Unsolved Neurodevelopmental and Neuromuscular Disorders
Collaborators: University of Toronto
EpilepsyTriplet and other repeats
Talk
Fri Oct 23
2:15 pm
A scalable platform for exon-skipping antisense oligonucleotide therapy development for inborn genetic diseases
Operationalizing Precision: Frameworks, Platforms, and Target Discovery for Individualized Genomic Therapies
Collaborators: University of Toronto
Precision medicineComputational toolsDatabasesGene therapy
Weksberg Labsickkids.ca/en/staff/w/rosanna-weksberg
Dry lab
Develops genome-wide DNA methylation classifiers and bioinformatic pipelines, including artificial intelligence, for rare neurodevelopmental disorders. Uses EpigenCentral to classify uncertain variants.
35 papers since 2024
Update on Cancer Predisposition Syndromes and Surveillance Guidelines for Childhood Brain Tumors
Clinical Cancer Research, 2024
Update on Surveillance for Wilms Tumor and Hepatoblastoma in Beckwith–Wiedemann Syndrome and Other Predisposition Syndromes
Clinical Cancer Research, 2024
Update on Pediatric Cancer Surveillance Recommendations for Patients with Neurofibromatosis Type 1, Noonan Syndrome, CBL Syndrome, Costello Syndrome, and Related RASopathies
Clinical Cancer Research, 2024
Source: OpenAlex author A5036444068
Funded by McLaughlin Centre, Leukemia & Lymphoma Society of Canada +2 more
Ontario Brain Institute, Renewal of Province of Ontario Neurodevelopmental Disorders Network (POND) · 2018–2023
“2018–2023: Renewal of Province of Ontario Neurodevelopmental Disorders Network (POND).”
Leukemia & Lymphoma Society of Canada, Late Neurocognitive Deficits in ALL Survivors: DNA Methylation Biomarkers · 2019–2021
“Leukemia & Lymphoma Society of Canada”
Heart and Stroke Foundation, Impact of Gestational Diabetes on Offspring Epigenome, Adiposity, and Cardiometabolic Risk Factors · 2018–2021
“Heart and Stroke Foundation”
+1 more on the lab page
Source: lab pages
8 platforms and techniques
Analyzes
EpigenCentral, Genome-wide DNA methylation-based assays, Genome-wide microarray platforms
Techniques
Machine learning, Artificial intelligence, Bioinformatics, Episignature classification, Tissue-agnostic modeling
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
Episignatures for ASXL1, ASXL2, and RING1 Variants Enable Accurate Classification of Clinically Overlapping Neurodevelopmental Disorders
Epigenomics
Collaborators: University of California, Los Angeles
EpigeneticsIntellectual and developmental disabilityNeurodevelopmentalMethylation
Poster
Thu Oct 22
4:15 pm
Accelerated prenatal episignature development via transformation of blood-derived episignatures into cell-type agnostic classifiers
Prenatal, Perinatal, Reproductive, and Developmental Genetics
Collaborators: Leiden University, Hamilton Health Sciences
Machine learningMethylationPrenatal diagnosisRare variants
Symposium
Fri Oct 23
8:35 am
New advances in epigenomic analysis for precision medicine
Epi-Mutations: The Underrepresented Paradigm in Genetics
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Combined Genetic and Epigenetic Sequencing Enables Precision Diagnosis of Kabuki Syndrome Type 1
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: Johns Hopkins University, Kennedy Krieger Institute +1 more
EpigeneticsGenetic testingIntellectual and developmental disabilityLong-read sequencing
Yuen Lablab.research.sickkids.ca/yuen
Wet + dry lab~12 people
Analyzes short- and long-read WGS and develops computational algorithms for genome-wide tandem-repeat screens. Focuses on neurodevelopmental and neurological disorders.
22 papers since 2024
Comprehensive whole-genome sequence analyses provide insights into the genomic architecture of cerebral palsy
Nature Genetics, 2024
C9orf72 repeat expansion creates the unstable folate-sensitive fragile site FRA9A
NAR Molecular Medicine, 2024
Genome-wide enhancer-associated tandem repeats are expanded in cardiomyopathy
EBioMedicine, 2024
Source: OpenAlex author A5038752074
6 platforms and techniques
Analyzes
short-read whole-genome sequencing (WGS), long-read whole-genome sequencing (WGS)
Techniques
genome-wide screens of repetitive DNA, tandem-repeat genotyping, zebrafish models, variant characterization
Source: lab pages
Currently hiring
“The Yuen Lab is always looking for talented individuals to join!”
Source: lab positions page
No funding stated
Moderator
Wed Oct 21
11:00 am
Poster
Thu Oct 22
4:15 pm
Functional analysis of DIP2B in zebrafish reveals conserved roles in cardiac function linked to repeat-associated cardiomyopathy
Molecular Effects of Genetic Variation
Collaborators: University of Toronto
Molecular pathophysiologyCardiovascular systemTransgenic modelCandidate gene
Poster
Fri Oct 23
2:30 pm
Tandem Repeat Expansions in Tetralogy of Fallot: A Multi-Cohort, Multi-Omics Study
Complex Traits and Polygenic Disorders
Collaborators: University of Toronto, Ted Rogers Centre for Heart Research +4 more
Long-read sequencingTriplet and other repeatsRNA-seqMethylation
Poster
Fri Oct 23
2:30 pm
Sex-biased de novo variant burden and structural genomic landscape in ADHD and OCD
Complex Traits and Polygenic Disorders
Collaborators: Queens University, Holland Bloorview Kids Rehabilitation Hospital +2 more
NeurodevelopmentalTriplet and other repeatsPsychiatric geneticsExome/genome sequencing
Genetics & Genome Biologysickkids.ca/en/research/research-programs/genetics-genome-biology
Wet + dry lab~61 people
Analyzes whole-genome sequence data and DNA methylation assays with AI pipelines. Uses genetics and genomics for paediatric disease diagnosis, risk prediction and treatment.
122 papers since 2024
The pathways for nanoparticle transport across tumour endothelium
Nature Nanotechnology, 2025
Discovering nanoparticle corona ligands for liver macrophage capture
Nature Nanotechnology, 2025
Targeting axonal guidance dependencies in glioblastoma with ROBO1 CAR T cells
Nature Medicine, 2024
Source: OpenAlex author A5086112491
Funded by Canada Research Chair program, Canadian Institutes of Health Research (CIHR)
Canada Research Chair program · active
A federal award that pays part of the chair holder's salary plus research support, five years for Tier 2 and seven for Tier 1.
“The Canada Research Chair program is designed to attract and retain some of the world’s most accomplished and promising minds”
Canadian Institutes of Health Research (CIHR), Foundation Scheme and Project funding · active
Canada's federal health-research funder, the equivalent of the NIH.
“In Canadian Institutes of Health Research (CIHR) competitions for Foundation Scheme and Project funding, GGB members have consistently exceeded the success rates nationally.”
Source: lab pages
14 platforms and techniques
Analyzes
whole genome sequence data, genomic structural variation, genome-wide DNA methylation-based assays, patient sequence and phenotype data, high-performance computing
Techniques
CRISPR-Cas9 genome editing, bioinformatic analytic pipelines, computer and statistical analysis, cell-and organismal models, DNA repair/replication systems, human recombinant proteins, disease-relevant animal models, mouse models of laminopathies and muscular dystrophy, NOD mouse model
Source: lab pages
Currently hiring
“We are hiring! Scientist Genome Editing, Genetic Models of Disease, and Advanced Therapeutics”
Source: lab positions page
Poster
Thu Oct 22
4:15 pm
Genetic data sharing by clinical laboratories in Canada: A position statement by the Canadian College of Medical Geneticists (CCMG)
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: University of Toronto, McGill University +10 more
DatabasesLaboratory genetics and genomicsGenetic variationVariant interpretation
Poster
Thu Oct 22
4:15 pm
The burden of secondary findings from genome sequencing across genetic ancestry groups in Canada and the United States
Evolutionary and Population Genetics
Collaborators: University of Toronto, University Health Network +3 more
Exome/genome sequencingPopulation geneticsPrecision medicineVariant interpretation
Hayeems Lablab.research.sickkids.ca/hayeems
Dry lab~21 people
Evaluates genome-wide sequencing, exome sequencing and genetic testing with C-GUIDE and P-GUIDE. Studies maternal-child genomic care with Genome-wide Sequencing Ontario and CHILD-BRIGHT.
55 papers since 2024
Data-driven consideration of genetic disorders for global genomic newborn screening programs
Genetics in Medicine, 2025
Mainstreaming of clinical genetic testing: A conceptual framework
Genetics in Medicine, 2025
Family‐centred care interventions for children with chronic conditions: A scoping review
Health Expectations, 2024
Source: OpenAlex author A5044819903
12 platforms and techniques
Analyzes
Genome-wide sequencing (GWS), Exome sequencing, Whole genome sequencing (WGS), Non-Invasive Prenatal Testing (NIPT), Auto-antibody screening assays, The Genetics Navigator
Techniques
Applied health services and policy research, Outcome-measure development and validation, Measurement science and co-design with patient partners, Semi-structured interviews, Medical record review and administrative-data linkage, Mixed-methods hybrid implementation-effectiveness design
Source: lab pages
Currently hiring
“We are currently accepting students at the MSc, PhD, and Post-doctoral levels.”
Source: lab positions page
No funding stated
Poster
Wed Oct 21
2:30 pm
Adolescents’ perspectives on the personal utility of genetic testing
Genetic Counseling, ELSI, and Education
Collaborators: University of Toronto, Children's Hospital of Eastern Ontario +5 more
Clinical geneticsEducationEthical, legal, and social implicationsGenetic testing
Poster
Fri Oct 23
2:30 pm
The Clinician-reported Genetic testing Utility InDEX for Critical Care (C-GUIDE Critical Care): Preliminary evidence of construct validity
Health Services Research and Implementation Science
Collaborators: Nationwide Children's Hospital, University of Utah +1 more
Clinical geneticsDiagnosticsPolicy issues
Wilson Labwilsonlab.org
Wet + dry lab~14 people
Analyzes scRNA-seq, RNA sequencing and ChIP-exo data with comparative genomics. Studies genome regulation, evolution and human disease.
9 platforms and techniques
Analyzes
scRNA-seq, RNA sequencing, ChIP-exo
Techniques
Comparative genomics, Functional studies, CRISPR/Cas9, Single-cell analysis, Mouse models, Zebrafish development
Source: lab pages
Currently hiring
“We will be taking UofT MoGen graduate rotation students in September.”
Source: lab positions page
No funding stated
Poster
Wed Oct 21
2:30 pm
Understanding Treatment Response and Disease Outcomes in Pediatric Lupus Using Whole Blood RNA-sequencing
Complex Traits and Polygenic Disorders
Collaborators: University of Toronto
Autoimmune disorderBioinformaticsComplex diseasesRNA-seq
Poster
Thu Oct 22
4:15 pm
Biallelic TOP2B TOPRIM domain variants identified in a child with syndromic developmental diease are perinatal lethal in mice
Mendelian Phenotypes
Collaborators: University of Toronto, Children's Hospital of Philadelphia +3 more
Exome/genome sequencingModel organismsNeurodevelopmentalRare variants
Centre for Applied Genomics (TCAG)tcag.ca
Wet + dry lab~127 people
Runs Illumina NovaSeq 6000, MiSeq, PacBio Sequel IIe and Oxford Nanopore PromethION platforms. Supports human genomics and disease research worldwide.
Funded by Genome Canada, Canada Foundation for Innovation +2 more
Genome Canada, Ontario Genomics Institute (OGI-033) · active
“Major funding for The Centre for Applied Genomics is provided by the Government of Canada through Genome Canada and the Ontario Genomics Institute (OGI-033).”
Canada Foundation for Innovation, CFI · active
“significant grant support from Genome Canada, the Canada Foundation for Innovation (CFI), the Ontario Ministry of Economic Development and Innovation, SickKids Foundation”
Ontario Ministry of Economic Development and Innovation · active
“significant grant support from Genome Canada, the Canada Foundation for Innovation (CFI), the Ontario Ministry of Economic Development and Innovation, SickKids Foundation”
+1 more on the lab page
Source: lab pages
19 platforms and techniques
Works with
Illumina NovaSeq 6000, Illumina MiSeq, PacBio Sequel IIe, Oxford Nanopore PromethION, ABI 3730XL, Affymetrix CytoScanHD array, Illumina EPIC or 450k arrays, Affymetrix/Illumina SNP arrays
Techniques
Fluorescence in situ hybridization (FISH), G-band karyotyping, DNA extraction and cell-line immortalization, Genome assembly and annotation, Variant detection, Genome-wide association analysis, Methylation array analysis, Metagenomic assembly, qPCR validation, Human iPSC, Mouse embryonic stem cells
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Genes/variants for diagnostic testing and pre-clinical research in Autism Spectrum Disorder.
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: University of Toronto
AutismNeurodevelopmentalIdentification of disease genesGenotype-phenotype correlations
Cardiac Genome Clinictedrogersresearch.ca/cardiac-genome-clinic
Wet + dry lab
Investigates heart-failure genetics using genome-wide sequencing and standard genetics services. Uses patient clinical and genomic data to improve diagnosis, treatment and precision management.
Funded by Ted Rogers Centre for Heart Research
Ted Rogers Centre for Heart Research · 10 years
“the Cardiac Genome Clinic is funded for 10 years by the Ted Rogers Centre”
Source: lab pages
7 platforms and techniques
Works with
Whole-genome sequencing (WGS), GeneTerpret, Whole-exome sequencing, SCIP
Techniques
Pharmacogenomics, Genome interpretation, Copy-number variant interpretation
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Congenital NAD deficiency disorder-associated gene variants in thoracic aortic aneurysms and aortic valve disease
Mendelian Phenotypes
Collaborators: Ted Rogers Centre for Heart Research, University of Toronto +1 more
Cardiovascular systemCandidate geneCharacterization of disordersEtiology
Hiraki Lablab.research.sickkids.ca/hiraki/our-team
~18 people
Studies rare systemic inflammatory disease using genome-wide sequencing in patient and family cohorts. Focuses on systemic lupus, neonatal lupus and immune-inflammatory dysregulation.
58 papers since 2024
2024 American College of Rheumatology ( ACR ) Guideline for the Screening, Treatment, and Management of Lupus Nephritis
Arthritis & Rheumatology, 2025
2025 American College of Rheumatology ( ACR ) Guideline for the Treatment of Systemic Lupus Erythematosus
Arthritis Care & Research, 2025
Source: OpenAlex author A5001657809
Funded by Canada Research Chair
Canada Research Chair, Rare Systemic Inflammatory Diseases (Tier 2) · active
A federal award that pays part of the chair holder's salary plus research support, five years for Tier 2 and seven for Tier 1.
“Canada Research Chair in Rare Systemic Inflammatory Diseases (Tier 2)”
Source: lab pages
1 platform and technique
Techniques
genome-wide sequencing
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
Monozygotic triplets discordant for cardiac neonatal lupus erythematosus: case report and epigenetic pilot study
Epigenomics
Collaborators: Tecnológico de Monterrey
Autoimmune disorderCardiovascular systemClinical geneticsEpigenetics
Mital Lablab.research.sickkids.ca/mital
Wet + dry lab~12 people
Studies whole-genome, whole-exome and RNA-sequencing data, plus patient-derived iPSCs, in childhood heart disease. Applies findings to congenital heart disease, cardiomyopathy and pediatric heart failure.
30 papers since 2024
Genomic analysis of 11,555 probands identifies 60 dominant congenital heart disease genes
Proceedings of the National Academy of Sciences, 2025
Expanding the phenotypic spectrum of NOTCH1 variants: clinical manifestations in families with congenital heart disease
European Journal of Human Genetics, 2024
Myosin inhibitor reverses hypertrophic cardiomyopathy in genotypically diverse pediatric iPSC-cardiomyocytes to mirror variant correction
Cell Reports Medicine, 2024
Source: OpenAlex author A5071239027
Funded by Heart & Stroke Foundation
Heart & Stroke Foundation, Ontario Chair in Cardiovascular Science · active
“Heart & Stroke Foundation Ontario Chair in Cardiovascular Science”
Source: lab pages
10 platforms and techniques
Works with
whole-genome sequencing, whole-exome sequencing, RNA-sequencing, cardiac magnetic resonance spectroscopy (MRS)
Techniques
patient-derived iPSC cardiac lineages, systems biology, gene and protein expression profiling, machine learning, pharmacogenetic approaches, iPSC-derived cardiomyocytes
Source: lab pages
Currently hiring
“Current opportunities to work in Mital Lab can be found in SickKids Career Page”
Source: lab positions page
Poster
Wed Oct 21
2:30 pm
Blood-derived RNA-sequencing for detecting splice-disrupting variants in pediatric cardiac disorders
Omics Technologies
Collaborators: University of Southampton, University of Sheffield +1 more
Cardiovascular systemGenomicsMulti-omicsRNA-seq
Ocular Genetics Programsickkids.ca/en/care-services/clinical-departments/ophthalmology-vision-sciences
Wet + dry lab~12 people
Performs whole-exome/whole-genome sequencing, visual electrophysiology and organoid/animal-model studies in inherited retinal disease. Supports genetic diagnosis, therapeutic development and patient-reported outcomes.
Funded by Fighting Blindness Canada, SickKids Foundation
SickKids Foundation, Henry Brent Chair in Innovative Pediatric Ophthalmology · 2018–Present
“2018–Present: Henry Brent Chair in Innovative Pediatric Ophthalmology- SickKids Foundation Program.”
Fighting Blindness Canada · active
“Sponsored by Fighting Blindness Canada, we have developed and administered an in-house collaborative National Registry for Inherited Retinal Diseases.”
Source: lab pages
16 platforms and techniques
Runs
Whole-exome sequencing, Whole-genome sequencing, Full-field ERG (ffERG), Multifocal ERG (mfERG), Pattern ERG (pERG), Hand-held ERG, Electro-oculogram (EOG), Visual evoked potentials (VEPs)
Techniques
Genome sequencing analysis for genotype/phenotype correlation, Natural history studies, Visual electrophysiology protocol testing, Therapeutic interventional clinical trials, Patient-reported outcomes, Organoid models, Animal models, Mouse ocular phenotyping
Source: lab pages
Currently hiring
“Apply for a one-year fellowship in the Ocular Genetics Program”
Source: lab positions page
Poster
Wed Oct 21
2:30 pm
Unbiased Long-Read Whole-Genome Sequencing Enables High-Resolution Mapping of Transgene Concatenation and Off-target Genomic Disruption in a Mouse Model
Mendelian Phenotypes
Collaborators: University of Toronto, Lunenfeld-Tanenbaum Research Institute +1 more
Genome editing/CRISPRBioinformaticsTransgenic modelSequencing technology
Ocular Genetics Research Teamsickkids.ca/en/care-services/clinical-departments/ocular-genetics
Wet + dry lab~12 people
Performs research genetic testing with whole exome and whole genome sequencing. Aims to improve genetic diagnosis and therapies for inherited retinal diseases.
Funded by Fighting Blindness Canada
Fighting Blindness Canada, National Registry for Inherited Retinal Diseases · active
“Sponsored by Fighting Blindness Canada, we have developed and administered an in-house collaborative National Registry for Inherited Retinal Diseases.”
Source: lab pages
9 platforms and techniques
Works with
Whole exome sequencing, Whole genome sequencing, Genome sequencing analysis, Specialized visual electrophysiology protocol testing
Techniques
Electrophysiology protocols, Mouse ocular phenotyping, Surrogate cellular models, Organoid models, Animal models
Source: lab pages
Currently hiring
“Apply for a one-year fellowship in the Ocular Genetics Program”
Source: lab positions page
Poster
Thu Oct 22
4:15 pm
Developing Enzyme Assay as a Strategy to Validate ‘Variants of Uncertain Significance’ in Patients with Inherited Retinal Dystrophies
Molecular Effects of Genetic Variation
Cellular metabolismGenetic testingGenetic variationGenotype-phenotype correlations
Scott Lablab.research.sickkids.ca/scott
Wet + dry lab~7 people
Studies zebrafish cardiac development using transgenic and mutant models, live imaging, single-cell RNAseq and ATACseq. Targets congenital heart disease, cardiac regeneration and craniofacial malformations.
32 papers since 2024
Pharmacological pain management in patients with rheumatoid arthritis: a narrative literature review
BMC Medicine, 2025
Pain management in people with inflammatory arthritis: British Society for Rheumatology guideline scope
Rheumatology Advances in Practice, 2024
Gabapentinoid use and the risk of fractures in patients with inflammatory arthritis: nested case–control study in the Clinical Practice Research Datalink Aurum
BMC Medicine, 2024
Source: OpenAlex author A5016759142
8 platforms and techniques
Analyzes
single-cell RNAseq, ATACseq
Techniques
CRISPR models, Transgenic zebrafish models, Live imaging, Comparative genomics, Zebrafish embryos, Small-molecule therapeutic screens
Source: lab pages
No funding stated · No openings posted
Poster
Thu Oct 22
4:15 pm
Using deeply conserved developmental enhancers to identify a TBX20 enhancer mutation contributing to congenital heart disease
Molecular Effects of Genetic Variation
Collaborators: University of Toronto
Gene regulationRare variantsCardiovascular systemChromatin
Strug Lablab.research.sickkids.ca/strug
Dry lab~19 people
Develops statistical methods for cystic fibrosis and epilepsy genetics using RNA-seq, next-generation sequencing and PacBio long-read sequencing. Identifies therapeutic targets and builds prognostic models.
28 papers since 2024
Large-scale genome-wide association analyses identify novel genetic loci and mechanisms in hypertrophic cardiomyopathy
Nature Genetics, 2025
Directional integration and pathway enrichment analysis for multi-omics data
Nature Communications, 2024
Longitudinal changes in BMD in adults with cystic fibrosis
Journal of Bone and Mineral Research, 2024
Source: OpenAlex author A5041161022
Funded by Canada Research Chair
Canada Research Chair, Tier 1 Canada Research Chair in Genome Data Science · active
A federal award that pays part of the chair holder's salary plus research support, five years for Tier 2 and seven for Tier 1.
“Tier 1 Canada Research Chair in Genome Data Science”
Source: lab pages
8 platforms and techniques
Analyzes
PacBio long-read sequencing, RNA-seq, Next-generation sequencing
Techniques
De novo genome assembly, Pangenome visualization, Differential expression analysis, Genome-wide association, Predictive modeling
Source: lab pages
Currently hiring
“For more information on available graduate, postdoctoral or volunteer positions in the Strug Lab, please send us a message using the form below:”
Source: lab positions page
Poster
Thu Oct 22
4:15 pm
Epigenetic Age Acceleration in Cystic Fibrosis Is Reversed by CFTR Modulator Therapy Through Reductions in Inflammation and Glycemia
Epigenomics
Collaborators: University of Toronto
EpigeneticsLong-read sequencingMendelian disorderMethylation
Technology Assessment at SickKids (TASK)lab.research.sickkids.ca/task
Dry lab~12 people
Evaluates whole-genome, exome and pharmacogenomic testing using cost-effectiveness, microcosting and pediatric cohort data. Supports child-health technology and policy decisions.
35 papers since 2024
Guidelines for Reporting Outcomes in Trial Reports: The CONSORT-Outcomes 2022 Extension
Carolina Digital Repository (University of North Carolina at Chapel Hill), 2024
Paving the path for implementation of clinical genomic sequencing globally: Are we ready?
Health Affairs Scholar, 2024
Guidelines for Reporting Outcomes in Trial Protocols: The SPIRIT-Outcomes 2022 Extension
Carolina Digital Repository (University of North Carolina at Chapel Hill), 2024
Source: OpenAlex author A5083390736
Funded by Canada Research Chair
Canada Research Chair, Economic Evaluation and Technology Assessment in Child Health · active
A federal award that pays part of the chair holder's salary plus research support, five years for Tier 2 and seven for Tier 1.
“Canada Research Chair in Economic Evaluation and Technology Assessment in Child Health”
Source: lab pages
12 platforms and techniques
Analyzes
Whole genome sequencing (WGS), Exome sequencing, Pharmacogenomics testing, Maternal genotyping, Thiopurine methyltransferase genotype testing
Techniques
Health technology assessment, Health economic evaluation, Cost-effectiveness analysis, Microcosting, Decision analysis, Discrete choice experiments, Systematic reviews
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Including the Excluded: A Scoping Review to Understand the Concept of Personal Utility Among Underrepresented Communities
Genetic Counseling, ELSI, and Education
Collaborators: University of Waterloo, University of Toronto +4 more
Ethical, legal, and social implicationsPolicy issuesPsychosocial issuesGenetic counseling
Statistical Analysistcag.ca/staff/index.html
Dry lab~5 people
Analyzes Affymetrix, Illumina, aCGH, Agilent oligonucleotide, SNP-array and methylation-array data. Provides study design, power calculations, interpretation and grant-writing support to client projects.
Funded by Genome Canada, Ontario Genomics Institute
Genome Canada · active
“Major funding for The Centre for Applied Genomics is provided by the Government of Canada through Genome Canada and the Ontario Genomics Institute (OGI-033).”
Ontario Genomics Institute, OGI-033 · active
“Major funding for The Centre for Applied Genomics is provided by the Government of Canada through Genome Canada and the Ontario Genomics Institute (OGI-033).”
Source: lab pages
16 platforms and techniques
Analyzes
Affymetrix, Exon arrays, Illumina, aCGH, BAC arrays, Agilent oligonucleotide arrays, Affymetrix/Illumina SNP arrays, Illumina EPIC or 450k arrays
Techniques
Genetic linkage mapping, Genome-wide association analysis, Haplotype estimation, Differential expression analysis, Copy-number variation analysis, Variant detection, Chromatin mapping, Metagenomic assembly
Source: lab pages
No openings posted
Moderator
Sat Oct 24
8:15 am
MacDonald Lab
Works in rare disease.
Poster
Fri Oct 23
2:30 pm
Expanding the clinical applications of proteomics in rare Mendelian disorder diagnostics
Omics Technologies
Collaborators: Université de Montréal
Clinical geneticsGenomicsMendelian disorderProteomics
Marshall Lab
Works in rare disease and clinical genetics.
Poster
Wed Oct 21
2:30 pm
Detection of ATAD3 Duplications in a Highly Homologous Genomic Locus by Combined Short- and Long-read DNA/RNA Sequencing
Laboratory Genetics and Genomics
Collaborators: McMaster Children's Hospital, Biologie du Développement et Cellules Souches
Alternative splicingBioinformaticsClinical geneticsCopy number/structural variation
Translational Genomics node of the Precision Child Health initiative
Works in rare disease and clinical genetics.
Poster
Fri Oct 23
2:30 pm
Deploying a multi’omics approach to address the diagnostic gap in rare diseases: the DECODE(u)R study
Omics Technologies
Collaborators: University of Toronto, Centre Hospitalier Universitaire Sainte-Justine +1 more
DiagnosticsLong-read sequencingMulti-omicsProteomics
5 more presenters — research group not yet identified

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