ASHG 2026 · Tier 1 Academic

Harvard Medical School at ASHG 2026

Boston, Massachusetts

Harvard Medical School at ASHG 2026 in Montréal: 16 presentations (14 posters, 1 featured symposium, 1 lightning talk); 10 research groups.

16
presentations on the program
10
research groups identified
1
sessions invited to or moderated
5
Reviewers’ Choice abstracts

Explore everyone at ASHG 2026 →

OrganizationASHG 2026 Attendance
Harvard Medical School
Boston, Massachusetts
8 PhD Students · 4 PIs · 3 Postdocs · 1 Staff Scientist
Sunyaev Labsunyaevlab.hms.harvard.edu/wiki/%21web
Dry lab~15 people
Develops computational and statistical methods for whole-genome sequencing, GWAS and epigenomic datasets. Studies genetic variation, cancer genomics and rare diseases through the Undiagnosed Diseases Network.
24 papers since 2024
Deciphering the impact of genomic variation on function
Nature, 2024
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods
Genome biology, 2024
Quantifying constraint in the human mitochondrial genome
Nature, 2024
Source: OpenAlex author A5068462201
Funded by NIH
NIH, Common Fund · active
“a research study backed by the NIH Common Fund program”
Source: lab pages
11 platforms and techniques
Analyzes
whole-genome sequencing, GWAS, epigenomic datasets, tandem mass spectrometry, gene expression QTL (eQTL), single-cell data
Techniques
machine learning, rare variant association testing, polygenic risk scoring, population genetics modeling, mutation-rate modeling
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Transposable elements record a history of tandem repeat evolution and transitions from functional to neutral equilibria.
Evolutionary and Population Genetics
Evolutionary geneticsGenetic instabilityGenomic structureNatural selection
Poster
Thu Oct 22
4:15 pm
★ Reviewers’ Choice
Concordant pleiotropic effects between gene pairs reveal molecular mechanisms of disease
Statistical Genetics and Genetic Epidemiology
Complex traitsIdentification of disease genesLarge-scale biobanksStatistical genetics
Poster
Thu Oct 22
4:15 pm
Inference of elevated mutation rates and variant effects using 731k exomes
Evolutionary and Population Genetics
Collaborators: Massachusetts General Hospital, Brigham and Women's Hospital +1 more
Large-scale biobanksMathematical modelingNatural selectionPopulation genetics
Poster
Thu Oct 22
4:15 pm
A catalog of pathogenic variant compensations reveals protein language models capture distal and proximal epistasis
Artificial Intelligence and Machine Learning
Artificial intelligenceBioinformaticsProtein structureEvolutionary genetics
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Intragenically bound TFs regulate RNA polymerase II rate and co-transcriptional splicing, underlying a hidden layer of human genetic variation
Molecular Effects of Genetic Variation
Collaborators: Altius Institute for Biomedical Sciences, University of Washington
Transcription factorSplicing mechanismsVariant interpretationGene regulation
Talkowski Labtalkowski.mgh.harvard.edu/about/people-2
Wet + dry lab~39 people
Studies structural variation using whole-genome sequencing, long-read sequencing and iPSC-derived neural cell lines. Supports studies of autism, fetal anomalies and psychiatric disorders.
79 papers since 2024
Genome Sequencing for Diagnosing Rare Diseases
New England Journal of Medicine, 2024
Author Correction: A genomic mutational constraint map using variation in 76,156 human genomes
Nature, 2024
A harmonized public resource of deeply sequenced diverse human genomes
Genome Research, 2024
Source: OpenAlex author A5060291693
Funded by NSF, NIH +1 more
NSF, graduate research fellowship · active
“is an NSF graduate research fellow”
NIH, F31 predoctoral fellowship · active
“as well as an NIH F31 predoctoral fellow”
NIH, K99/R00 pathway to independence grant
“received a NIH K99/R00 pathway to independence grant”
Source: lab pages
15 platforms and techniques
Works with
Whole Genome Sequencing, Illumina HiSeq 2500, Illumina HiSeq 2000, Illumina MiSeq, Covaris E220, Agilent Tapestation 2200, Roche LightCycler 480, GATK-SV pipeline
Techniques
CRISPR/Cas9 genome editing, Short- and long-read whole-genome sequencing, Genome editing in stem cell models, iPSC-derived neural cell lines, Optical mapping, Pangenome-based tools, CRISPRi-TnSeq
Source: lab pages
Currently hiring
“We are always willing to consider highly motivated young scientists interested in postdoctoral fellowships”
Source: lab positions page
Talk
Wed Oct 21
2:03 pm
Discovery of genetic risk factors in stillbirth highlights evolutionary constraint and incomplete penetrance
Clinical Genetics Across the Lifespan: From Gene Discovery to Prenatal, Developmental, and Pharmacogenomic Insights
Collaborators: Massachusetts General Hospital, Broad Institute +6 more
Clinical geneticsDevelopmentEvolutionary geneticsIdentification of disease genes
Poster
Wed Oct 21
2:30 pm
Long read sequencing reveals novel structural variants underlying complex trait associations
Complex Traits and Polygenic Disorders
Collaborators: Massachusetts General Hospital, Broad Institute +4 more
Copy number/structural variationLong-read sequencingLinkage disequilibriumComplex traits
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
Discovery of genetic risk factors in stillbirth highlights evolutionary constraint and incomplete penetrance
Prenatal, Perinatal, Reproductive, and Developmental Genetics
Collaborators: Massachusetts General Hospital, Broad Institute +6 more
Clinical geneticsDevelopmentEvolutionary geneticsIdentification of disease genes
Poster
Thu Oct 22
4:15 pm
★ Reviewers’ Choice
The complex landscape of SINE-VNTR-Alu elements and their functional impact from long-reads sequencing and multiomics profiling in All of Us
Molecular Effects of Genetic Variation
Collaborators: Massachusetts General Hospital, Broad Institute +1 more
Copy number/structural variationExome/genome sequencingLarge-scale biobanksPopulation genetics
Moderator
Fri Oct 23
11:00 am
Splicing in Disease Etiology
AEGIS Labaegislab.bio
Dry lab~1 people
Builds algorithms for cancer structural variants and somatic mutations from genome-sequencing data. Uses mutational signatures and AI with clinicians for early detection and drug-target discovery.
5 platforms and techniques
Analyzes
duplex sequencing
Techniques
supervised machine learning, mutational signature analysis, structural variant analysis, synthetic lethality
Source: lab pages
Currently hiring
“We are looking for a postdoctoral research fellow with a background in genomics, applied machine learning, molecular pathology, synthetic lethality, or DNA repair.”
Source: lab positions page
No funding stated
Poster
Fri Oct 23
2:30 pm
Replication fork directionality reveals how structural variants arise under replication stress
Cancer
Collaborators: University of Manchester
Copy number/structural variationGenomicsMolecular therapeuticsAneuploidy
Bod Labbodlab.mgh.harvard.edu
Deciphers phenotypic and functional B cell states within tumors using multi-omics technologies. Identifies B cell biomarkers and novel cancer targets using genetic and genomics approaches.
13 papers since 2024
Overcoming resistance to immunotherapy by targeting CD38 in human tumor explants
Cell Reports Medicine, 2025
The DAV132 colon-targeted adsorbent does not interfere with plasma concentrations of antibiotics but prevents antibiotic-related dysbiosis: a randomized phase I trial in healthy volunteers
Nature Communications, 2024
Disrupting CD38-driven T cell dysfunction restores sensitivity to cancer immunotherapy
bioRxiv (Cold Spring Harbor Laboratory), 2024
Source: OpenAlex author A5103221881
2 platforms and techniques
Techniques
multi-omics technologies, genetic and genomics approaches
Source: lab pages
No funding stated · No openings posted
Poster
Wed Oct 21
2:30 pm
Proteomics at genomic scales: insights from longitudinal and pan-cancer cohorts
Cancer
Collaborators: Broad Institute
ProteomicsCancerImmune system
Gupta Labgupta.bwh.harvard.edu
Wet + dry lab~10 people
Applies human genetics, genomics, single-cell analysis and CRISPR perturbation screens to vascular disease. Seeks mechanisms and therapeutic targets for coronary artery disease and stroke.
24 papers since 2024
Endothelial cell-related genetic variants identify LDL cholesterol-sensitive individuals who derive greater benefit from aggressive lipid lowering
Nature Medicine, 2025
Convergence of coronary artery disease genes onto endothelial cell programs
Nature, 2024
Deciphering the impact of genomic variation on function
Nature, 2024
Source: OpenAlex author A5021299742
Funded by NIH, National Heart Lung and Blood Institute +3 more
NIH, NIH Director’s New Innovator Award · 2019
“NIH (NIH Director’s New Innovator Award, 2019)”
National Heart Lung and Blood Institute · active
“the National Heart Lung and Blood Institute”
Broad · active
“the Broad”
+2 more on the lab page
Source: lab pages
14 platforms and techniques
Runs
Whole Exome Sequencing, Whole Genome Sequencing, Single-cell RNA-sequencing, ATAC-seq, Perturb-seq, Pooled CRISPR perturbation screens
Techniques
Genetic epidemiology, Epigenetics, High-throughput CRISPR/Cas9-based genome editing, Genome-wide association studies, Flow cytometry, Cellular histology, Confocal microscopy/live-cell imaging, Mouse aorta model
Source: lab pages
Currently hiring
“The Gupta Laboratory ... is looking for a self-motivated, curious research assistant interested in using new genomic methods to study vascular disease.”
Source: lab positions page
Symposium
Fri Oct 23
9:05 am
Complex disease: Integrating maps of genome function with genetic risk scores to improve cardiovascular disease prevention
The IGVF Consortium: Deciphering the Impact of Genomic Variation on Genome Function
Gusev Labgusevlab.org
Dry lab
Develops statistical methods for single-cell transcriptomics, epigenomics and electronic health record data. Studies disease mechanisms, treatment response and prediction in large clinical cohorts.
112 papers since 2024
Lung cancer in patients who have never smoked — an emerging disease
Nature Reviews Clinical Oncology, 2024
Genetic and molecular architecture of complex traits
Cell, 2024
Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain
Science, 2024
Source: OpenAlex author A5044886059
Funded by Common Fund of the Office of the Director of the National Institutes of Health
Common Fund of the Office of the Director of the National Institutes of Health, Genotype-Tissue Expression (GTEx) Project · active
“The Genotype-Tissue Expression (GTEx) Project was supported by the Common Fund of the Office of the Director of the National Institutes of Health.”
Source: lab pages
7 platforms and techniques
Analyzes
ATAC-seq
Techniques
Statistical modeling, GWAS, Single-cell transcriptomics, Machine learning, Survival analysis, Fine-mapping
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Relatives' similarity in test score performance is explained by a wide range of genetic and environmental parameters
Complex Traits and Polygenic Disorders
EducationGene environment interactionGenotype-phenotype correlationsStatistical genetics
Loh Labstatgen.bwh.harvard.edu
Dry lab~5 people
Develops computational tools for quantitative genetics and biobank-scale genetic data. Studies copy-number variants, variable number tandem repeats and mosaic chromosomal alterations.
22 papers since 2024
The Somatic Mosaicism across Human Tissues Network
Nature, 2025
Genetic drivers and cellular selection of female mosaic X chromosome loss
Nature, 2024
Protein-altering variants at copy number-variable regions influence diverse human phenotypes
Nature Genetics, 2024
Source: OpenAlex author A5048717316
Funded by Burroughs Wellcome Fund, Glenn Foundation for Medical Research and AFAR +2 more
Burroughs Wellcome Fund, Career Award at the Scientific Interfaces · active
“Burroughs Wellcome Fund Career Award at the Scientific Interfaces”
Glenn Foundation for Medical Research and AFAR, Grant for Junior Faculty · active
“Glenn Foundation for Medical Research and AFAR Grant for Junior Faculty”
Broad Institute, Next Generation Fund award · active
“a Broad Institute Next Generation Fund award”
+1 more on the lab page
Source: lab pages
9 platforms and techniques
Analyzes
SNP-array genotyping, Whole-genome sequencing reference panels
Techniques
Statistical phasing, Genotype imputation, Haplotype-informed CNV detection, Linear mixed models, HMM-based algorithms, BOLT-LMM, BOLT-REML
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
The landscape of mosaic chromosomal alterations across healthy human tissues
Omics Technologies
Collaborators: Broad Institute, Brigham and Women's Hospital
AneuploidyChromosomal abnormalitiesMosaicismMutation detection
O'Connor Laboconnorlab.hms.harvard.edu
Dry lab~8 people
Develops statistical methods for GWAS, exome, genotype and perturbation-atlas data. Uses them to study common-disease and complex-trait genetic architecture.
Funded by K99/R00
K99/R00, Unraveling Complex Disease Genetics Using Graphs and Graph Algorithms · active
“received an NOA for his K99/R00 application titled “Unraveling Complex Disease Genetics Using Graphs and Graph Algorithms.””
Source: lab pages
12 platforms and techniques
Analyzes
GWAS data, Exome data, Genotype data, Perturbation atlases, Pangenome graphs, Summary statistics
Techniques
Graphical models, Genome-wide genealogies, Functional annotation integration, Rare-variant association analysis, Heritability partitioning, Statistical genetics
Source: lab pages
Currently hiring
“We are currently looking for doctoral students, masters students, and postdoctoral researchers to join the lab.”
Source: lab positions page
Poster
Wed Oct 21
2:30 pm
Li–Stephens read-graph inference for pangenome variant calling from short reads
Omics Technologies
Genetic variationGenomic structureGenomicsPopulation genetics
Gao Labdgaolab.org
Dry lab~3 people
Develops bioinformatics algorithms for bulk and single-cell transcriptomics and epigenomics, including scRNA and RNASeq. Applies them to neurodegeneration and computational treatment development.
19 papers since 2024
AMH protects the ovary from doxorubicin by regulating cell fate and the response to DNA damage
Proceedings of the National Academy of Sciences, 2025
Splice modulators target PMS1 to reduce somatic expansion of the Huntington’s disease-associated CAG repeat
Nature Communications, 2024
Source: OpenAlex author A5014242703
Funded by NIH, NIH +1 more
NIH, R00 · active
“Functional Characterization of Mobile Element Insertions in Human Brain (NIH R00 Funded)”
NIH, R01 · active
The NIH's standard multi-year research project grant.
“Landscape of Poison Exon in Human Diseases (NIH R01 Funded)”
CCXDP · active
“Treatment Development for X-linked Dystonia-Parkinsonism (CCXDP Funded)”
Source: lab pages
8 platforms and techniques
Analyzes
scRNA, RNASeq, Spatial transcriptional measurements
Techniques
Deep learning, CRISPR-based genome engineering, iPSC-derived neuronal culture, Cerebral organoids, Anti-sense oligonucleotides (ASOs)
Source: lab pages
Currently hiring
“#### Current Openings”
Source: lab positions page
Price Labhsph.harvard.edu/research/price-lab
Works in population genetics and computational genetics.
24 papers since 2024
Deciphering the impact of genomic variation on function
Nature, 2024
Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles
Nature Genetics, 2024
Pervasive findings of directional selection realize the promise of ancient DNA to elucidate human adaptation
bioRxiv (Cold Spring Harbor Laboratory), 2024
Source: OpenAlex author A5066797582
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
Learning nonlinear contributions of functional annotations to complex disease heritability with neural networks
Artificial Intelligence and Machine Learning
Deep learningGenome-wide association studyHeritabilityStatistical genetics

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