ASHG 2026 · Hospital & health system

Children's Hospital of Philadelphia at ASHG 2026

Philadelphia, Pennsylvania

Children's Hospital of Philadelphia at ASHG 2026 in Montréal: 9 presentations (7 posters, 1 featured symposium, 1 platform talk); 8 research groups.

9
presentations on the program
8
research groups identified
1
sessions invited to or moderated

Explore everyone at ASHG 2026 →

OrganizationASHG 2026 Attendance
Children's Hospital of Philadelphia
Philadelphia, Pennsylvania
4 PIs · 2 Staff Scientists · 2 Clinicians · 1 Postdoc
Center for Applied Genomicsresearch.chop.edu/center-for-applied-genomics/team
Wet + dry lab~56 people
Provides next-generation sequencing, single-cell sequencing, genotyping and biorepository services, including Sanger/TaqMan workflows. Uses them to diagnose and treat children with rare and complex disorders.
155 papers since 2024
Selection, optimization and validation of ten chronic disease polygenic risk scores for clinical implementation in diverse US populations
Nature Medicine, 2024
Dependency-aware deep generative models for multitasking analysis of spatial omics data
Nature Methods, 2024
Exome sequencing of 20,979 individuals with epilepsy reveals shared and distinct ultra-rare genetic risk across disorder subtypes
Nature Neuroscience, 2024
Source: OpenAlex author A5088244425
Funded by Children’s Hospital of Philadelphia
Children’s Hospital of Philadelphia, $40 million commitment to genomically characterize approximately 100,000 children · active
“He leads a $40 million commitment from Children’s Hospital of Philadelphia to genomically characterize approximately 100,000 children.”
Source: lab pages
8 platforms and techniques
Runs
Next-generation sequencing, Single-cell sequencing, Genotyping, Sanger sequencing, TaqMan
Techniques
DNA extraction, Variant validation, Copy-number-variation studies
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Biological-state-dependent genetic susceptibility reveals ancestry-structured 1q31 architecture in steroid-dependent asthma
Statistical Genetics and Genetic Epidemiology
Collaborators: University of Pennsylvania, University of Iceland
AsthmaGenetic epidemiologyGenome-wide association studyPhenotype
Poster
Thu Oct 22
4:15 pm
NF-κB-centered pathway-restricted polygenic scores are associated with asthma morbidity across adult and pediatric cohorts
Complex Traits and Polygenic Disorders
AsthmaPolygenic risk scoreGene environment interaction
Poster
Fri Oct 23
2:30 pm
Preclinical evaluation of AAV9-mediated CHAMP1 gene therapy in a mouse model of CHAMP1 disorder
Mendelian Phenotypes
Collaborators: University of Pennsylvania
BehaviorGene therapyModel organismsNervous system
Division of Genomic Diagnosticschop.edu/centers-programs/pathology-and-laboratory-medicine/division-genomic-diagnostics
Wet lab~31 people
Runs cytogenetics, chromosomal microarray, exome sequencing, FISH and next-generation sequencing tests. Supports diagnosis, cancer care and transplant management.
23 papers since 2024
Placental Malperfusion Is Associated With Adverse Outcomes in Congenital Heart Disease and With Genetic Variants in Placental Developmental Pathways
Journal of the American College of Cardiology, 2025
Parents’ perceptions of the utility of genetic testing in the NICU
Genetics in Medicine, 2025
Functional characterization of 2,832 JAG1 variants supports reclassification for Alagille syndrome and improves guidance for clinical variant interpretation
The American Journal of Human Genetics, 2024
Source: OpenAlex author A5028020710
14 platforms and techniques
Runs
Cytogenetics, Chromosomal microarray analysis, Exome sequencing, Fluorescence in situ hybridization (FISH), Next-generation sequencing panels, Cancer transcriptome analysis (RNA sequencing), HLA typing by next-generation sequencing, Karyotype
Techniques
Molecular cytogenetics, MLPA, Sanger sequencing, HLA antibody screening, Donor-recipient crossmatching, Chimerism studies
Source: lab pages
No funding stated · No openings posted
Poster
Thu Oct 22
4:15 pm
Revealing the hidden landscape of selection: detecting divergent, soft, and incomplete signatures in diverse human genomes
Evolutionary and Population Genetics
Collaborators: Duke University, University of Pennsylvania
Statistical geneticsPopulation geneticsEvolutionary geneticsEvolution
Poster
Fri Oct 23
2:30 pm
Exome-Wide Copy Number Variation in 142,357 Individuals from Autism Spectrum Families in the Simons SPARK Cohort
Artificial Intelligence and Machine Learning
Collaborators: University of Pennsylvania, Centre Hospitalier Universitaire Sainte-Justine +1 more
Autoimmune disorderBioinformaticsCopy number/structural variationExome/genome sequencing
22q and You Centerchop.edu/centers-programs/22q-and-you-center
Provides diagnostic and genetic testing, including FISH for 22q11.2 deletion. Studies 22q deletion syndrome to discover causes and improve affected children’s lives.
3 papers since 2024
Shorter Distance to Main Academic Center Associated with Better Longitudinal Care and Follow-Up in Adult Patients with 22q11.2 Deletion Syndrome
Journal of Human Immunity, 2026
Cardiac Complexity Predicts Increased Immune Diagnostic Burden in 22q11.2 Deletion Syndrome
Journal of Human Immunity, 2026
Genome-wide tandem repeat expansions modify schizophrenia risk in the presence of a 22q11.2 deletion
Molecular Psychiatry, 2026
Source: OpenAlex author A5129245907
2 platforms and techniques
Runs
FISH (fluorescence in situ hybridization)
Techniques
FISH (fluorescence in situ hybridization)
Source: lab pages
No funding stated · No openings posted
Poster
Fri Oct 23
2:30 pm
Impact of cell free DNA screening for 22q11.2 copy number variants
Prenatal, Perinatal, Reproductive, and Developmental Genetics
Collaborators: University of Pennsylvania, University of Toronto +1 more
Chromosomal deletionsCell-free DNADiagnosticsEthical, legal, and social implications
DBHi Bioinformaticsresearch.chop.edu/dbhi-bioinformatics/team
Dry lab~28 people
Analyzes WGS, exome, RNA-seq, optical-mapping, proteomics and array data from Illumina, PacBio, 10x Genomics and Bionano. Supports CHOP research and clinical applications.
48 papers since 2024
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage
Nature Methods, 2025
Aging and putative frailty biomarkers are altered by spaceflight
Scientific Reports, 2024
Astronaut omics and the impact of space on the human body at scale
Nature Communications, 2024
Source: OpenAlex author A5010519012
15 platforms and techniques
Analyzes
Illumina, PacBio, 10x Genomics, Bionano, ChIP-seq, Methyl-seq, Expression arrays, DDA, DIA and PRM proteomics
Techniques
Single-cell RNA-seq, RNA velocity, Optical mapping, Proteogenomics, ChIP-seq, Methyl-seq, Machine learning
Source: lab pages
No funding stated · No openings posted
Symposium
Wed Oct 21
8:55 am
The Common Fund Data Ecosystem Data Distillery Knowledge Graph: Unifying Common Fund insights through structured connectivity
Integrating AI and Knowledge Graphs for Human Genetics and Beyond: Innovations from the NIH Common Fund Data Ecosystem
Division of Genetic and Genomic Medicinechop.edu/centers-programs/division-genetic-genomic-medicine/our-team
Wet + dry lab~61 people
Performs genomic testing and analyzes genomic sequencing data. Applies these approaches to pediatric genetic disease diagnosis and therapeutic development.
35 papers since 2024
SeqFirst: Building equity access to a precise genetic diagnosis in critically ill newborns
The American Journal of Human Genetics, 2025
Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans
The Journal of Experimental Medicine, 2024
A syndromic neurodevelopmental disorder caused by rare variants in PPFIA3
The American Journal of Human Genetics, 2024
Source: OpenAlex author A5001024294
Funded by National Institutes of Health, National Institutes of Health +2 more
National Institutes of Health, Somatic Cell Genome Editing Program (SCGE) · active
“The grant, funded by the National Institutes of Health through its Somatic Cell Genome Editing Program”
National Institutes of Health, R01NS107392 · active
The NIH's standard multi-year research project grant.
“National Institutes of Health (NIH) grant R01NS107392”
Children's Hospital of Philadelphia, Roberts Collaborative Functional Genomics Rapid grant · active
“the CHOP Roberts Collaborative Functional Genomics Rapid grant”
+1 more on the lab page
Source: lab pages
7 platforms and techniques
Analyzes
Genomic sequencing
Techniques
Phenotyping, Modeling in fly and stem cells, Fruit-fly models, Human stem-cell models, CRISPR/Cas9 gene deletion, Prime editing
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
Brain splicing QTL mapping reveals RNA processing mechanisms associated with autism spectrum disorder
Cancer
Collaborators: University of Pennsylvania
Alternative splicingGenetic variationNeurodevelopmentalTranscriptome
Ahrens-Nicklas Labahrensnicklaslab.com
Wet + dry lab~14 people
Develops gene and cell therapies using CRISPR/Cas9, iPSC and mouse models, VSDI, EEG and multiomic analysis. Studies rare pediatric metabolic disorders and neurodegeneration.
20 papers since 2024
Developing a therapeutic in vivo prime editing strategy for MCAD deficiency
Molecular Genetics and Metabolism, 2026
Developing and deploying personalized gene-editing therapies
Molecular Genetics and Metabolism, 2026
Understanding the Patient Journey, Current Treatment Approaches and Emerging Therapeutic Opportunities in CLN2 Batten Disease
medRxiv, 2026
Source: OpenAlex author A5128153718
12 platforms and techniques
Works with
Voltage Sensitive Dye Imaging (VSDI), EEG, CRISPR/Cas9-mediated genome editing, iPSC-based cell models, Biobank genomic datasets
Techniques
CRISPR/Cas9 genome editing, iPSC-based cell models, Mouse models, Multiomic analysis, Ex vivo gene therapy with hematopoietic stem cell transplant, Adenine base editing, Natural history and biomarker studies
Source: lab pages
No funding stated · No openings posted
🏅ASHG Early Career Award
Attendee
inNamed in a LinkedIn post about ASHG 2026
Bhoj Laboratoryresearch.chop.edu/bhoj-laboratory
Wet lab~1 people
Studies pediatric disease genes using sequencing, patient cells, mouse models and iPSC cells. Develops targeted therapies for TBCK-, H3F3A/B- and MAP4K4-related neurologic disease.
36 papers since 2024
Role of CAMK2D in neurodevelopment and associated conditions
The American Journal of Human Genetics, 2024
Secondary ACMG and non-ACMG genetic findings in a multiethnic cohort of 16,713 pediatric participants
Genetics in Medicine, 2024
KOLF2.1J iPSCs carry CNVs associated with neurodevelopmental disorders
Cell stem cell, 2024
Source: OpenAlex author A5091497415
Funded by Burroughs Wellcome Foundation, University of Pennsylvania +1 more
Burroughs Wellcome Foundation, Career Award for Medical Scientists · 2018
“Career Award for Medical Scientists, Burroughs Wellcome Foundation, 2018”
University of Pennsylvania, Neurodevelopmental Research Salary Support Award · 2014, 2015
“Neurodevelopmental Research Salary Support Award, University of Pennsylvania, 2014, 2015”
University of Pennsylvania, Institute for Translational Medicine and Therapeutics Scholarship · 2014
“Institute for Translational Medicine and Therapeutics Scholarship, University of Pennsylvania, 2014”
Source: lab pages
6 platforms and techniques
Techniques
patient cells, mouse models, iPSC cells, animal models, pathway analysis, drug screen
Source: lab pages
No openings posted
Raymond G. Perelman Center for Cellular and Molecular Therapeutics
Works in computational genetics.
Talk
Thu Oct 22
8:30 am
A multi-modal nanopore foundation model enables de novo single-molecule discovery of DNA and RNA modifications
Sequence Models Transforming Genetics and Genomics
Collaborators: Drexel University, University of Pennsylvania
Artificial intelligenceComputational toolsEpigeneticsLong-read sequencing

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