ASHG 2026 · Tier 1 Academic

Baylor College of Medicine at ASHG 2026

Houston, Texas

Baylor College of Medicine at ASHG 2026 in Montréal: 53 presentations (41 posters, 5 featured symposia, 5 platform talks); 20 research groups.

53
presentations on the program
20
research groups identified
7
sessions invited to or moderated
7
Reviewers’ Choice abstracts

Explore everyone at ASHG 2026 →

OrganizationASHG 2026 Attendance
Baylor College of Medicine
Houston, Texas
15 PhD Students · 9 Faculty · 6 PIs · 5 Staff Scientists
Human Genome Sequencing Centerhgsc.bcm.edu
Wet + dry lab~42 people
Generates and analyzes WGS, WES, RNA-Seq capture and targeted NGS panels. Supports rare disease, population genomics, cancer and functional genomics.
63 papers since 2024
The Somatic Mosaicism across Human Tissues Network
Nature, 2025
Genomic data in the All of Us Research Program
Nature, 2024
Empowering personalized pharmacogenomics with generative AI solutions
Journal of the American Medical Informatics Association, 2024
Source: OpenAlex author A5059626751
Funded by National Human Genome Research Institute (NHGRI), Chan Zuckerberg Initiative
National Human Genome Research Institute (NHGRI), Population Genomic Screening Network · five-year
“The NIH's National Human Genome Research Institute has funded the Population Genomic Screening Network, a five-year, roughly $46.5 million initiative”
Chan Zuckerberg Initiative, TMC-CZI Project · two-year
Philanthropic science funding from the Chan Zuckerberg Initiative.
“This transformational project is made possible by a two-year grant from the Chan Zuckerberg Initiative”
Source: lab pages
12 platforms and techniques
Works with
WGS, WES, RNA-Seq capture, Targeted NGS panels, Sanger, MLPA, ChIP-seq, ATAC-seq
Techniques
De novo assembly, Variant annotation and prioritization, Structural variant analysis, Functional genetic studies in animal models and human cells
Source: lab pages
No openings posted
Talk
Wed Oct 21
1:51 pm
Clinically integrated genomic screening yields reportable findings in >90% of individuals
Advances in Clinical Genomics in the Era of AI, Long-Read Sequencing, Precision Medicine, and Genomic Care Delivery
Collaborators: Columbia University Irving Medical Center
Electronic health recordsGenetic counselingGenetic testingPharmacogenomics
Poster
Wed Oct 21
2:30 pm
Toward a unified large language model framework for literature-based ACMG/AMP evidence extraction
Artificial Intelligence and Machine Learning
Artificial intelligenceLaboratory genetics and genomicsVariant interpretationPrecision medicine
Poster
Wed Oct 21
2:30 pm
Clinical implementation of urine global metabolomics for detection of inborn errors of metabolism
Omics Technologies
Collaborators: Baylor Genetics
Biochemical pathologyClinical testingGenetic testingMetabolic disorder
Poster
Wed Oct 21
2:30 pm
★ Reviewers’ Choice
Clinically integrated genomic screening yields reportable findings in >90% of individuals
Health Services Research and Implementation Science
Collaborators: Columbia University Irving Medical Center
Electronic health recordsGenetic counselingGenetic testingPharmacogenomics
Poster
Wed Oct 21
2:30 pm
Moderator
Thu Oct 22
1:30 pm
Poster
Thu Oct 22
4:15 pm
A Multi-Agent Framework for High-Throughput Multiomics at a Clinical Genome Center
Artificial Intelligence and Machine Learning
Artificial intelligenceBioinformaticsClinical testingLaboratory genetics and genomics
Poster
Thu Oct 22
4:15 pm
Multi-Omics Profiling of a Cohort of Xia-Gibbs Syndrome Individuals
Omics Technologies
MethylationMulti-omicsNeurodevelopmentalProteomics
Poster
Thu Oct 22
4:15 pm
Multi-caller whole-genome CNV analysis of severe schizophrenia identifies pathogenic variants and recurrent gene disruptions in UBXN7 and TENM2
Complex Traits and Polygenic Disorders
Copy number/structural variationPsychiatric geneticsLaboratory genetics and genomicsVariant calling
Symposium
Fri Oct 23
8:15 am
Introduction
AI Across the Diagnostic Odyssey: From Variant Interpretation to Computable Phenotypes
Symposium
Fri Oct 23
9:40 am
Closing remarks
AI Across the Diagnostic Odyssey: From Variant Interpretation to Computable Phenotypes
Talk
Fri Oct 23
2:00 pm
Mission Aware Multi Omics Profiling of Early Human Adaptation to Spaceflight
Multi-Omics Perspectives on Immune Regulation, Adaptation, and Inflammatory Disease
Collaborators: University of Central Florida, Poznan University of Medical Sciences +1 more
Multi-omicsProteomicsSingle-cellRNA-seq
Poster
Fri Oct 23
2:30 pm
Breaking the diagnostic ceiling: genetic findings and AI-enabled discovery in the GREGoR Consortium
Artificial Intelligence and Machine Learning
Artificial intelligenceExome/genome sequencingIdentification of disease genesMendelian disorder
Atkinson Labegatkinsonlab.com
Dry lab~10 people
Analyzes GWAS, gnomAD, UK Biobank and All of Us Researcher Workbench data with statistical genomics methods. Studies admixed populations, psychiatric traits and human evolutionary history.
61 papers since 2024
Effects of intermittent senolytic therapy on bone metabolism in postmenopausal women: a phase 2 randomized controlled trial
Nature Medicine, 2024
IL-23R is a senescence-linked circulating and tissue biomarker of aging
Nature Aging, 2024
Biomarkers of cellular senescence and major health outcomes in older adults
GeroScience, 2024
Source: OpenAlex author A5038589760
Funded by National Library of Medicine, NIH +1 more
NIH, All of Us Research Scholar · 2023–2024
“selected as an NIH All of Us Research Scholar for the 2023–2024 cohort”
NIH, Blueprint and BRAIN Initiative DSPAN Scholar · 2024
“in 2024, as an NIH Blueprint and BRAIN Initiative DSPAN Scholar”
National Library of Medicine, Training Program in Biomedical Informatics and Data Science, T15LM007093
“she was a Predoctoral Fellow of the National Library of Medicine (NLM) Training Program in Biomedical Informatics and Data Science (T15LM007093).”
Source: lab pages
14 platforms and techniques
Analyzes
GWAS, gnomAD, UK Biobank, All of Us Researcher Workbench, Tractor workflow, Admix-kit
Techniques
Local ancestry inference, Genome-wide association studies, Polygenic risk prediction, Rare variant burden testing, eQTL analysis, Epistasis and genetic interaction analysis, Genotype-by-age interaction analysis, Evolutionary statistics
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
MosaicSim: A Novel Simulator Revealing the Impact of Coverage, Allele Frequency, and Sequencing Platform on Mosaic Variant Detection
Molecular Effects of Genetic Variation
Collaborators: Weill Cornell Medicine, University of North Carolina at Charlotte +1 more
Genetic variationVariant callingSomatic variantsBioinformatics
Poster
Thu Oct 22
4:15 pm
Leveraging LD to Improve Lp(a) Genetic Prediction Across Populations
Complex Traits and Polygenic Disorders
Collaborators: Rice University
Cardiovascular systemLinkage disequilibriumPolygenic risk scorePopulation genetics
Poster
Fri Oct 23
2:30 pm
The landscape of deleterious genetic interactions in the human genome
Evolutionary and Population Genetics
Collaborators: University of California, Los Angeles, Texas Children's Hospital
Rare variantsPopulation geneticsNatural selectionEvolutionary genetics
Poster
Fri Oct 23
2:30 pm
Ancestry-specific genetic architecture across 3,500 phenotypes reveals pervasive marginal effect size heterogeneity
Statistical Genetics and Genetic Epidemiology
Collaborators: Texas Children's Hospital
Genome-wide association studyPhenome-wide associationPopulation structureStatistical genetics
Poster
Fri Oct 23
2:30 pm
Improving gene discovery with rare variants in admixed American populations
Statistical Genetics and Genetic Epidemiology
Collaborators: Broad Institute, Johns Hopkins University
Complex traitsMethodologyPopulation geneticsRare variants
Moderator
Sat Oct 24
9:45 am
Bioinformatics Research Laboratorygenboree.org/site/team
Dry lab~16 people
Analyzes small and long RNA-seq, epigenomic and whole-exome sequencing data with Genboree Workbench tools. Covers ClinGen variant interpretation and ExRNA Atlas resources.
15 papers since 2024
Mapping MAVE data for use in human genomics applications
Genome biology, 2025
The Clinical Genome Resource (ClinGen): Advancing genomic knowledge through global curation
Genetics in Medicine, 2024
Generating Clinical-Grade Gene–Disease Validity Classifications Through the ClinGen Data Platforms
Annual Review of Biomedical Data Science, 2024
Source: OpenAlex author A5089918245
13 platforms and techniques
Analyzes
small RNA-seq, long RNA-seq, whole-exome next-generation sequencing, ChIP-seq, MeDIP, RNA-seq, 16S rRNA sequencing
Techniques
ACMG/AMP variant pathogenicity interpretation, k-means clustering, ChromHMM chromatin-state modeling, motif discovery, DESeq2 differential analysis, circular RNA detection
Source: lab pages
No funding stated · No openings posted
Poster
Thu Oct 22
4:15 pm
Information-Theoretic Prioritization of Pathogenic Noncoding Variants Reveals Subtype-Specific Regulatory Mechanisms in Congenital Heart Disease
Molecular Effects of Genetic Variation
Collaborators: Boston Children's Hospital, Icahn School of Medicine at Mount Sinai
Genetic variationBioinformaticsEpigeneticsStatistical genetics
Poster
Thu Oct 22
4:15 pm
A Computable Framework for Sequence Variant Classification v4 Criteria Specifications within the ClinGen CSpec Registry
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: Stanford University, Mayo Clinic +3 more
Clinical geneticsComputational toolsDatabasesVariant interpretation
Poster
Thu Oct 22
4:15 pm
A Scalable Framework for Defining Structural Variants in the ClinGen Allele Registry
Genetic, Genomic, and Epigenomic Resources and Databases
BioinformaticsComputational toolsCopy number/structural variationDatabases
Liu Labliuzlab.org
Dry lab~29 people
Develops AI models for genomics, scRNA-seq, bulk RNA-seq and NMR data. Applications include rare-disease diagnosis and autism-model validation with Texas Children’s Hospital and SPARK.
61 papers since 2024
AI-MARRVEL — A Knowledge-Driven AI System for Diagnosing Mendelian Disorders
NEJM AI, 2024
The clinical utility and diagnostic implementation of human subject cell transdifferentiation followed by RNA sequencing
The American Journal of Human Genetics, 2024
Acute MeCP2 loss in adult mice reveals transcriptional and chromatin changes that precede neurological dysfunction and inform pathogenesis
Neuron, 2024
Source: OpenAlex author A5004947640
Funded by NIH, Cancer Prevention and Research Institute of Texas +6 more
Cancer Prevention and Research Institute of Texas, Cancer Prevention and Research Institute of Texas Grant · 9/1/2024 - 8/31/2029
“Cancer Prevention and Research Institute of Texas Grant RP240131 9/1/2024 - 8/31/2029”
NIH, Autism Data Science Initiative (ADSI) · 9/29/2025 - 9/28/2028
“We recently secured support through the NIH Autism Data Science Initiative (ADSI) for Validate ASD”
CPRIT, Individual Investigator Research Award · 9/1/2017 - 8/31/2022
“CPRIT Individual Investigator Research Award RP170387 9/1/2017 - 8/31/2022”
+5 more on the lab page
Source: lab pages
12 platforms and techniques
Analyzes
scRNA-seq, bulk RNA-seq, single-cell multi-omics, NMR data
Techniques
machine learning, network-aware modeling, multi-omics integration, single-cell analysis, causal reasoning, cross-cohort benchmarking, code-blinded replication, Drosophila
Source: lab pages
Currently hiring
“We are always looking for motivated students to join our team.”
Source: lab positions page
Poster
Thu Oct 22
4:15 pm
Vision-based modeling of spatial genomic evidence enables interpretable copy number variant pathogenicity prediction
Artificial Intelligence and Machine Learning
Collaborators: Texas Children's Hospital, Yale University
Computational tools
Poster
Thu Oct 22
4:15 pm
Matched sibling analysis reveals oligogenic burden of rare damaging variants in autism spectrum disorder
Complex Traits and Polygenic Disorders
AutismBioinformaticsExome/genome sequencingRare variants
Symposium
Fri Oct 23
8:35 am
Agentic reasoning across genomes, RNA, and phenotype for rare disease diagnosis
AI Across the Diagnostic Odyssey: From Variant Interpretation to Computable Phenotypes
Sedlazeck Labfritzsedlazeck.github.io
Dry lab~12 people
Develops algorithms for structural-variant analysis of PacBio and Oxford Nanopore long reads, methylation and large-scale genomics. Applies them to disease, evolution and clinical genomics.
89 papers since 2024
Detection of mosaic and population-level structural variants with Sniffles2
Nature Biotechnology, 2024
Characterization and visualization of tandem repeats at genome scale
Nature Biotechnology, 2024
Comprehensive genome analysis and variant detection at scale using DRAGEN
Nature Biotechnology, 2024
Source: OpenAlex author A5037440162
13 platforms and techniques
Analyzes
PacBio, Oxford Nanopore Technologies MinION, DRAGEN, Single-cell whole-genome sequencing, Long-read RNA sequencing
Techniques
Structural variant detection, Tandem repeat detection, Phasing, Methylation calling, Variant calling, Mapping and assembly, CRISPR-Cas9, Machine learning
Source: lab pages
Currently hiring
“Position: Computational Post-Doctoral Researcher”
Source: lab positions page
No funding stated
Symposium
Wed Oct 21
8:15 am
Introduction
The All of Us Research Program At 10 Years: 500,000+ Genomes Advancing Precision Medicine
Symposium
Wed Oct 21
8:50 am
Genetic and epigenetic landscape of self-identified Hispanics in All of Us
The All of Us Research Program At 10 Years: 500,000+ Genomes Advancing Precision Medicine
Poster
Fri Oct 23
2:30 pm
A multi-tissue atlas of mosaic structural variation, tandem repeat instability, and DNA methylation across human tissues
Evolutionary and Population Genetics
Collaborators: Harvard University, University of Washington
BioinformaticsEpigeneticsGenetic variationGenomics
BCM-GREGoRgregorconsortium.org
Wet + dry lab
Generates exome/genome data on Illumina NovaSeq 6000 at Baylor HGSC and analyzes genomic data. Uses functional phenotyping to advance precision molecular diagnosis and gene-function research.
Funded by National Human Genome Research Institute (NHGRI)
National Human Genome Research Institute (NHGRI), U01HG011758 · active
“The GREGoR Consortium is funded by the National Human Genome Research Institute (NHGRI). Award U01HG011758.”
Source: lab pages
11 platforms and techniques
Works with
Illumina NovaSeq 6000, Custom HSGC exome capture reagent, custom TWIST, KAPA Hyper PCR-free reagents, Fluidigm SNPtrace, HGSC HgV analysis pipeline, Cassandra annotation tools
Techniques
Functional phenotyping, Exome sequencing, Genome sequencing, Variant calling, SNP genotyping for sample QC
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
TTC36 and autosomal recessive tyrosinemia: evidence from human genetics and functional validation
Mendelian Phenotypes
Collaborators: Columbia University Irving Medical Center, Texas Children's Hospital
Identification of disease genesMendelian disorderNewborn screeningMetabolic disorder
Talk
Fri Oct 23
2:00 pm
Haploinsufficiency of RNPS1, a Component of the Exon Junction Complex, Causes a Syndromic Neurodevelopmental Disorder with Skeletal Anomalies
Decoding Malformation Syndromes: New Disease Genes Across Organ Systems
Collaborators: Texas Children's Hospital, University of Cologne +14 more
Candidate geneCharacterization of syndromesIdentification of disease genesMalformation
in“our abstract on a novel neurodevelopmental-skeletal spliceosomopathy was selected for a platform presentation at ASHG 2026. Hope to see you in Montreal!”
Dhindsa Labdhindsalab.com/people
Wet + dry lab~16 people
Uses genome sequencing, single-cell RNA-sequencing, chromatin profiling, human iPSC-derived neurons and UK Biobank data. Studies genetic causes and mechanisms of neurological and other human diseases.
24 papers since 2024
Whole-genome sequencing of 490,640 UK Biobank participants
Nature, 2025
Disease prediction with multi-omics and biomarkers empowers case–control genetic discoveries in the UK Biobank
Nature Genetics, 2024
Genetic architecture of telomere length in 462,666 UK Biobank whole-genome sequences
Nature Genetics, 2024
Source: OpenAlex author A5049059460
Funded by American Brain Foundation, National Institutes of Health +1 more
American Brain Foundation · 2026
“Our lab was awarded a $2,000,000 grant from the American Brain Foundation”
National Institutes of Health, Director’s Early Independence Award (DP5) · 2023; up to five years
“8/2023 — Lab receives a 2023 NIH Director’s Early Independence Award (DP5)”
Hevolution and Rosenkranz foundations · August 2023; over two years
“This round of funding was launched in August of 2023 with Hevolution and Rosenkranz foundations to focus on high-risk high-reward studies in aging science.”
Source: lab pages
13 platforms and techniques
Works with
Genome sequencing, CRISPR-based functional genomics platform, Single-cell RNA-sequencing, Chromatin profiling, Electrophysiology assays, Transcriptomics, Metabolomics, Proteomics
Techniques
Human iPSC-derived neurons, Mouse and patient-derived iPSC models, Machine learning and AI, Statistical genetics, Phenome-wide association studies
Source: lab pages
Currently hiring
“We are currently recruiting at all levels.”
Source: lab positions page
Talk
Thu Oct 22
8:15 am
A large-scale Perturb-seq map of haploinsufficient neurodevelopmental disorder genes in iPSC-derived neurons reveal convergence and divergence in transcriptional programs
Chromatin in Motion: Epigenetic Control of Brain Development and Disease
Collaborators: Neurological Research Institute
Genome editing/CRISPRLaboratory genetics and genomicsNeurodevelopmentalChromatin
Poster
Thu Oct 22
4:15 pm
Establishment of a scalable automated pediatric biobank at Texas Children’s Hospital to advance equitable genomic research
Genetic, Genomic, and Epigenomic Resources and Databases
Large-scale biobanksGenetic variationGenomicsPrecision medicine
Wangler Labbcm.edu/research/faculty-labs/michael-wangler-lab/members
Wet lab~7 people
We study rare childhood diseases using medical genetics, genomics, and Drosophila models. We use Drosophila models for diagnostic paradigms.
54 papers since 2024
AI-MARRVEL — A Knowledge-Driven AI System for Diagnosing Mendelian Disorders
NEJM AI, 2024
Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans
The Journal of Experimental Medicine, 2024
A syndromic neurodevelopmental disorder caused by rare variants in PPFIA3
The American Journal of Human Genetics, 2024
Source: OpenAlex author A5091323267
6 platforms and techniques
Techniques
Drosophila melanogaster models, Clinical studies in rare disease, Genetic screening, Metabolomic studies, Exome sequencing, Functional validation
Source: lab pages
No funding stated · No openings posted
Poster
Fri Oct 23
2:30 pm
The Model Organisms Screening Center’s (MOSC) contributions to solving Undiagnosed Disease Network (UDN) cases
Molecular Effects of Genetic Variation
Collaborators: Texas Children's Hospital
Brain/nervous systemCharacterization of disordersClinical geneticsIdentification of disease genes
Poster
Fri Oct 23
2:30 pm
NLGN3 autism variants have distinct functional impact on synapses and sleep behavior in Drosophila
Molecular Effects of Genetic Variation
Collaborators: University of Manitoba
AutismGenetic variationInheritance patternsModel organisms
Zong Labbcm.edu/research/faculty-labs/chenghang-zong-lab/lab-members
Wet lab~3 people
Develops LCS-WGA, MATQ-seq and MATQ-drop for single-cell genomic and transcriptomic profiling. Uses genetically engineered mice to study pancreatic tumorigenesis and early cancer events.
16 papers since 2024
The Somatic Mosaicism across Human Tissues Network
Nature, 2025
Expression of Atoh1 , Gfi1 , and Pou4f3 in the mature cochlea reprograms nonsensory cells into hair cells
Proceedings of the National Academy of Sciences, 2024
Single-cell total-RNA profiling unveils regulatory hubs of transcription factors
Nature Communications, 2024
Source: OpenAlex author A5083291814
Funded by NIH
NIH, Director’s New Innovator Award · 2014-09
“2014-09: Zong lab awarded NIH Director’s New Innovator Award for cancer genomics.”
Source: lab pages
7 platforms and techniques
Runs
LCS-WGA, MATQ-seq, MATQ-drop, Damagenome profiling
Techniques
Genetically engineered mice models, Single-cell whole-genome amplification, Pancreatic intraepithelial neoplasia transcriptome profiling
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
SigFormer: an Attention-Based Framework for Robust Single-Sample Mutational Signature Decomposition
Omics Technologies
BioinformaticsDeep learningGenetic variationSomatic variants
Poster
Fri Oct 23
2:30 pm
Genome-wide High-Precision Duplex-seq Enables the Identification of Tissue-Specific Somatic Mutational Signatures in Normal Tissues
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: Harvard University
Somatic variantsVariant callingDatabasesArtificial intelligence
Center for Precision Medicine Modelsbcm.edu/research/research-centers/center-for-precision-medicine-models
Wet + dry lab~17 people
Produces and phenotypes Drosophila and mouse models, and analyzes exome, genome and human-model multi-omics data. Supports rare-disease diagnosis with clinicians and the Undiagnosed Diseases Network.
31 papers since 2024
A comprehensive atlas of AAV tropism in the mouse
Molecular Therapy, 2025
A GREB1-steroid receptor feedforward mechanism governs differential GREB1 action in endometrial function and endometriosis
Nature Communications, 2024
Improving laboratory animal genetic reporting: LAG-R guidelines
Nature Communications, 2024
Source: OpenAlex author A5026263256
Funded by NIH Office of Research Infrastructure Programs
NIH Office of Research Infrastructure Programs, U54 OD030165 · active
“is funded by the NIH Office of Research Infrastructure Programs”
Source: lab pages
13 platforms and techniques
Analyzes
exome analysis, genome analysis, transcriptomics analysis, human-model multi-omics data, rhesus macaque whole-genome and exome sequences
Techniques
CRISPR/SpCas9 guide RNA design, genome modification, phenotyping workflows, Drosophila melanogaster, Mus musculus, microinjection, prime editing, recombinase mediated cassette exchange
Source: lab pages
No openings posted
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Precision Medicine Models for Rare and Undiagnosed Mendelian Disorders
Mendelian Phenotypes
Collaborators: Texas Children's Hospital
Genome editing/CRISPRIdentification of disease genesMendelian disorderModel organisms
Diagnostic Laboratoriesbcm.edu/departments/molecular-and-human-genetics/our-team/diagnostic-laboratory-faculty
Wet lab~29 people
Runs clinical whole-exome, whole-genome and transcriptome sequencing, chromosomal microarray and beadchip assays. Supports rare-disease diagnosis through Baylor Genetics and the Undiagnosed Diseases Network.
Funded by NHGRI, NHGRI
NHGRI, R35 HG011311 — Characterizing disease-causing variants using personal genomes with large recurrent deletions · 07/01/2021 - 06/30/2026
“Characterizing disease-causing variants using personal genomes with large recurrent deletions #R35 HG011311 (07/01/2021 - 06/30/2026) NHGRI”
NHGRI, U01 HG007942 — Clinical Sequencing Core Facility for the Undiagnosed Diseases Network · 09/22/2014 - 06/30/2022
“Clinical Sequencing Core Facility for the Undiagnosed Diseases Network #U01 HG007942 (09/22/2014 - 06/30/2022) NHGRI”
Source: lab pages
8 platforms and techniques
Runs
Clinical whole-exome sequencing, Clinical whole-genome sequencing, Clinical transcriptome sequencing, Chromosomal microarray analysis, Highly multiplexed beadchip assay
Techniques
Patient-derived cell transdifferentiation, Clinical exome reanalysis, Antisense oligonucleotide screening
Source: lab pages
Currently hiring
“We generally have positions available every year.”
Source: lab positions page
Poster
Fri Oct 23
2:30 pm
Shared Germline and Clinical Signatures Between Neurodevelopmental Disorders and Pediatric Malignancies
Cancer
Collaborators: Children's Hospital of Philadelphia
CancerExome/genome sequencingGenetic variationMulti-omics
Epidemiology and Population Sciences Programtexaschildrens.org/tcri/our-research/areas-research/epidemiology
Dry lab~21 people
Studies childhood cancer using blood and saliva samples plus epidemiological, clinical and patient-reported data. Works through ACCESS, SALUD and REDIAL on prevention, outcomes and disparities.
38 papers since 2024
Metabolic syndrome in childhood, adolescent, and young adult cancer survivors: recommendations for surveillance from the International Late Effects of Childhood Cancer Guideline Harmonization Group
European Journal of Endocrinology, 2025
Episodes of acute methotrexate‐related neurotoxicity linked to compromised long‐term neurocognitive function
Pediatric Blood & Cancer, 2024
Toxicity profile of high‐dose methotrexate in young children with central nervous system tumors
Pediatric Blood & Cancer, 2024
Source: OpenAlex author A5045344677
Funded by National Cancer Institute, National Institutes of Health, Cancer Prevention and Research Institute of Texas +1 more
National Cancer Institute, National Institutes of Health, UG3CA260607 and UH3CA260607 · active
“This study is supported by the National Cancer Institute of the National Institutes of Health under award numbers UG3CA260607 and UH3CA260607.”
Cancer Prevention and Research Institute of Texas, RP160771 and RP210064 · active
“This study is supported by the Cancer Prevention and Research Institute of Texas under award numbers RP160771, RP210064.”
National Cancer Institute, National Institutes of Health, Specialized Program of Research Excellence (SPORE); P20CA262733 and U54CA302464 · active
“REDIAL supported by the National Cancer Institute of the National Institutes of Health under award numbers P20CA262733 and U54CA302464.”
Source: lab pages
6 platforms and techniques
Techniques
DNA analyses, Genome-wide association studies (GWAS), Case-parent trio studies, Bioinformatics, genomics and epigenomics, Targeted and non-targeted metabolomics, Methylation risk-score biomarkers
Source: lab pages
No openings posted
Poster
Wed Oct 21
2:30 pm
Genome-wide bone marrow DNA methylation at diagnosis and end of induction measurable residual disease in pediatric acute lymphoblastic leukemia
Epigenomics
Collaborators: Texas Children's Hospital, Emory University +1 more
CancerEpidemiologyEpigenome-wide association studiesMethylation
Erwin Laberwinlab.org
Wet + dry lab~16 people
Studies repetitive DNA with long read sequencing data and computational workflows. Develops experimental and bioinformatic tools to characterize variants in human disease.
5 papers since 2024
Whole-genome variant detection in long-read sequencing data from ultralow input patient samples
Genome Research, 2026
DNA-FISH Metaphase Spreads to Distinguish Extrachromosomal DNA from Homogeneously Staining Regions in Human Cancer Cell Lines
Journal of Visualized Experiments, 2026
Cell-type-resolved somatic variant discovery from bulk long-read sequencing
medRxiv, 2026
Source: OpenAlex author A5068191084
8 platforms and techniques
Works with
Long-read sequencing, DNA-FISH metaphase spreads, COSMIC
Techniques
Computational workflows, RepeatMasker, Single-molecule methods, DNA-binding polyamides, Synthetic transcription elongation factors
Source: lab pages
Currently hiring
“We are recruiting researchers who recently graduated, or are about to, for an immersive two-year research experience”
Source: lab positions page
No funding stated
Poster
Fri Oct 23
2:30 pm
★ Reviewers’ Choice
Pervasive Tandem Repeat Heterogeneity in the Male Germline
Evolutionary and Population Genetics
Somatic variantsReproductive geneticsMosaicismLong-read sequencing
Laboratory Genetics and Genomics Fellowsbcm.edu/departments/molecular-and-human-genetics/education/clinical-laboratory-fellowships/fellows-and-alumni
~4 people
Trains Laboratory Genetics and Genomics fellows at Baylor Genetics in diagnostic testing. Covers constitutional and somatic testing, whole-exome sequencing and SNP-array comparative genomic hybridization.
4 platforms and techniques
Runs
whole exome sequencing, advanced oligonucleotide/SNP array comparative genomic hybridization, expanded carrier screening, large-scale metabolomics
Source: lab pages
Currently hiring
“We generally have positions available every year.”
Source: lab positions page
No funding stated
Poster
Wed Oct 21
2:30 pm
A multimodal genomic odyssey reveals complex biallelic DNM1 alterations in developmental and epileptic encephalopathy
Laboratory Genetics and Genomics
Collaborators: Baylor Genetics, Texas Children's Hospital
Clinical geneticsEpilepsyLaboratory genetics and genomicsNeurodevelopmental
Stankiewicz Labbcm.edu/research/faculty-labs/pawel-stankiewicz-lab
Dry lab~4 people
Analyzes chromosomal microarray, exome-sequencing and transcriptome data on lung-development disorders and somatic mosaicism. Studies FOXF1, TBX4-FGF10 and genomic rearrangements.
14 papers since 2024
Whole-genome sequencing reveals individual and cohort level insights into chromosome 9p syndromes
Genome Medicine, 2025
Dysregulation of miRNA expression and excitation in MEF2C autism patient hiPSC-neurons and cerebral organoids
Molecular Psychiatry, 2024
Detection of Clinically Relevant Monogenic Copy-Number Variants by a Comprehensive Genome-Wide Microarray with Exonic Coverage
Clinical Chemistry, 2024
Source: OpenAlex author A5075195054
Funded by NIH/NICHD (R01HD087292), NIH/NHLBI (R01HL137203) +1 more
NIH/NICHD (R01HD087292), Unrecognized scale and clinical relevance of somatic mosaicism · 2017 - 2022
The NIH's standard multi-year research project grant.
“R01HD087292 2017 - 2022 NIH/NICHD”
NIH/NHLBI (R01HL137203), Epigenomic dysfunction at 16q24.1 vascular defects and perinatal consequences · 2017 - 2021
The NIH's standard multi-year research project grant.
“R01HL137203 2017 - 2021 NIH/NHLBI”
NIH/NHLBI (R01HL101975), Pathogenetics of the FOX transcription factor gene cluster on 16q24.1 · 2010 - 2014
The NIH's standard multi-year research project grant.
“R01HL101975 2010 - 2014 NIH/NHLBI”
Source: lab pages
8 platforms and techniques
Analyzes
Chromosomal microarray, Exome sequencing
Techniques
Chromosomal microarray analysis, Exome sequencing, Immunohistochemical analysis, Nonallelic homologous recombination (NAHR), SNV/CNV somatic mosaicism, Human lung organogenesis
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
De novo balanced chromosomal translocations separating intact FOXF1 from its distant lung-specific enhancer in two families with lethal alveolar capillary dysplasia.
Molecular Effects of Genetic Variation
Collaborators: UNSW Sydney, Sydney Children's Hospital +2 more
Chromosomal abnormalitiesChromosomal structure/functionClinical geneticsCopy number/structural variation
Undiagnosed Diseases Centerbcm.edu/research/research-centers/undiagnosed-diseases-center/center-members
Wet + dry lab~34 people
Evaluates rare undiagnosed cases using WES/WGS, genomics, Drosophila screening and multi-omics. Supports diagnosis through the UDN and Baylor Genetics.
61 papers since 2024
AI-MARRVEL — A Knowledge-Driven AI System for Diagnosing Mendelian Disorders
NEJM AI, 2024
Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans
The Journal of Experimental Medicine, 2024
The clinical utility and diagnostic implementation of human subject cell transdifferentiation followed by RNA sequencing
The American Journal of Human Genetics, 2024
Source: OpenAlex author A5042694502
Funded by National Institutes of Health (NIH)
National Institutes of Health (NIH), Undiagnosed Diseases Network · active
“Undiagnosed Diseases Network is a National Institutes of Health (NIH)-funded program”
Source: lab pages
8 platforms and techniques
Works with
Whole-exome sequencing (WES), Whole-genome sequencing (WGS), Clinical untargeted metabolomics pipeline
Techniques
Drosophila functional screening, Bioinformatic tool development, Cell culture and conditional mouse models, Genomic variant curation and interpretation, Multi-omics disease-model profiling
Source: lab pages
No openings posted
Poster
Thu Oct 22
4:15 pm
★ Reviewers’ Choice
When Short Reads Fall Short: Oxford Nanopore Long-Read Sequencing Reveals Diagnostic Structural Variants and Resolves Repeat Expansion Architecture in Unsolved Rare Disease Families
Laboratory Genetics and Genomics
Long-read sequencingCopy number/structural variationTriplet and other repeatsIntellectual and developmental disability
Lee Labbcm.edu/research/faculty-labs/brendan-lee-lab
Wet lab~17 people
Studies dysplasias and inborn errors using mammalian tissues, stable isotopic measurements and multi-omic phenotyping. Develops cell and gene therapies with Texas Children’s clinics.
61 papers since 2024
AI-MARRVEL — A Knowledge-Driven AI System for Diagnosing Mendelian Disorders
NEJM AI, 2024
Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans
The Journal of Experimental Medicine, 2024
The clinical utility and diagnostic implementation of human subject cell transdifferentiation followed by RNA sequencing
The American Journal of Human Genetics, 2024
Source: OpenAlex author A5042694502
Funded by NIH, NIH +2 more
NIH, Rare Diseases Clinical Research Network (RDCRN) · active
“Our mechanistic discoveries are translated via clinical research ... as part of the NIH Rare Diseases Clinical Research Network.”
NIH, HEAL Initiative · active
“I lead the RE-JOIN consortium of the NIH HEAL initiative.”
All of Us, Evenings with Genetics Scholars Program · active
“I am committed to developing a scientific workforce as part of the All of Us Evenings with Genetics Scholars Program.”
+1 more on the lab page
Source: lab pages
8 platforms and techniques
Works with
Stable isotopic measurements, Exome sequencing
Techniques
Mammalian tissue and organ development, Helper-dependent adenoviral gene transfer, Gene discovery, Multi-omic phenotyping, TGF-beta, Wnt and Notch signaling, Clinical interventional studies
Source: lab pages
No openings posted
ClinGen Community Curation (C3)clinicalgenome.org/working-groups/clingen-community-curation-c3
Works in cancer genetics and clinical genetics.
Poster
Wed Oct 21
2:30 pm
Performance of preliminary SDHB specifications for ACMG/AMP sequence variant classification v3: A pilot assessment
Genetic, Genomic, and Epigenomic Resources and Databases
Collaborators: Texas Children's Hospital, The University of Sydney +5 more
Cancer syndromesEndocrine systemGenetic testingLaboratory genetics and genomics
Genome Assembly Group
Works in rare disease.
Moderator
Thu Oct 22
11:00 am
Poster
Thu Oct 22
4:15 pm
ClinGen variant curation in X-linked inherited retinal disease genes CACNA1F, CHM, NDP, NYX, OFD1, OPN1LW, OPN1MW, RP2, RPGR and RS1
Mendelian Phenotypes
Collaborators: University of California San Diego, University of Alberta +7 more
Clinical geneticsGenotype-phenotype correlationsSensory disordersVariant interpretation
Posey Laboratory
Works in rare disease.
Poster
Wed Oct 21
2:30 pm
Genomic Dissection of Septo-Optic Dysplasia Supports a Pathway-Defined Diagnostic Framework for Clinically Heterogeneous Rare Diseases
Mendelian Phenotypes
Collaborators: Baylor Genetics, Texas Children's Hospital
Characterization of syndromesCharacterization of disordersClinical geneticsDiagnostics
Moderator
Fri Oct 23
1:30 pm
8 more presenters — research group not yet identified

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